RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 USP3Q9Y6I4 520 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 MUC3AQ02505 3323 aa13.18□□□□□ -0.3
LRRC28-206ENST00000558471 HEPACAM2A8MVW5 462 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 M0QYV0 167 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 MED7O43513 233 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 GABBR2O75899 941 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 PRAMEF12O95522 483 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 SETSIPP0DME0 302 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 HDCP19113 662 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 AVPR1AP37288 418 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 GPD2P43304 727 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 PLA2G4AP47712 749 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 ZNF445P59923 1031 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 GPC5P78333 572 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 FANCCQ00597 558 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 PTK2Q05397 1052 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 GRM2Q14416 872 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 SNX30Q5VWJ9 437 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 PMF1Q6P1K2 205 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 DENND1BQ6P3S1 775 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 VITQ6UXI7 678 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 SLC47A2Q86VL8 602 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 UBALD2Q8IYN6 164 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 ARL14EPQ8N8R7 260 aaPredicted RBP13.17□□□□□ -0.3
LRRC28-206ENST00000558471 PDZD8Q8NEN9 1154 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 NEK11Q8NG66 645 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 KCTD13Q8WZ19 329 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 USP13Q92995 863 aaPredicted RBP13.17□□□□□ -0.3
LRRC28-206ENST00000558471 RNF38Q9H0F5 515 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 DUSP12Q9UNI6 340 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 CCL26Q9Y258 94 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 CUL9Q8IWT3 2517 aa13.17□□□□□ -0.3
LRRC28-206ENST00000558471 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
LRRC28-206ENST00000558471 TECTAO75443 2155 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 TRAV19A0A0A6YYK7 116 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 F8VZ95 297 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 OAS1P00973 400 aaKnown RBP13.16□□□□□ -0.3
LRRC28-206ENST00000558471 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 RGS7P49802 495 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 TKTL1P51854 596 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 JAM2P57087 298 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 BPIFB4P59827 614 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 CCDC186Q7Z3E2 898 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 MFSD6LQ8IWD5 586 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 CELF5Q8N6W0 485 aaKnown RBP13.16□□□□□ -0.3
LRRC28-206ENST00000558471 RNF214Q8ND24 703 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 NDRG1Q92597 394 aaKnown RBP13.16□□□□□ -0.3
LRRC28-206ENST00000558471 E2F7Q96AV8 911 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 NMUR1Q9HB89 426 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 LRRC4Q9HBW1 653 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 TLR8Q9NR97 1041 aaKnown RBP13.16□□□□□ -0.3
LRRC28-206ENST00000558471 TDP1Q9NUW8 608 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 OSER1Q9NX31 292 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 DAAM1Q9Y4D1 1078 aa13.16□□□□□ -0.3
LRRC28-206ENST00000558471 A0A1W2PQC6 194 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 A0A1W2PQH9 124 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 DPYSL4O14531 572 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 OLFM2O95897 454 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 CKMP06732 381 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 SRFP11831 508 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 LCP1P13796 627 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 CYP11B1P15538 503 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 PFKLP17858 780 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 PSMC3P17980 439 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 UBASH3AP57075 661 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 ZXDBP98169 803 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 ADIGQ0VDE8 80 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 MEA1Q16626 185 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 HECTD3Q5T447 861 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 PM20D1Q6GTS8 502 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 SCD5Q86SK9 330 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 WDTC1Q8N5D0 677 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 HSFY1Q96LI6 401 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 TRMT61BQ9BVS5 477 aaKnown RBP13.15□□□□□ -0.3
LRRC28-206ENST00000558471 ULBP1Q9BZM6 244 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 CCSER2Q9H7U1 834 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 OBP2AQ9NY56 170 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 PCDHGC3Q9UN70 934 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 TRIOO75962 3097 aa13.15□□□□□ -0.3
LRRC28-206ENST00000558471 PIK3R2O00459 728 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 COCHO43405 550 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 GFPT2O94808 682 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 ZBED1O96006 694 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 GDI1P31150 447 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 KRT9P35527 623 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 SOX5P35711 763 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 STAT1P42224 750 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 RPL34P49207 117 aaKnown RBP13.14□□□□□ -0.31
LRRC28-206ENST00000558471 TUBP50607 506 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 PDE6CP51160 858 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 SLC7A9P82251 487 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 SIGLEC14Q08ET2 396 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 FCHO2Q0JRZ9 810 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 ZNF268Q14587 947 aaPredicted RBP13.14□□□□□ -0.31
LRRC28-206ENST00000558471 TRIM67Q6ZTA4 783 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 BHLHA9Q7RTU4 235 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
LRRC28-206ENST00000558471 RIN3Q8TB24 985 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 BPIFB1Q8TDL5 484 aa13.14□□□□□ -0.31
LRRC28-206ENST00000558471 STK32AQ8WU08 396 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms