RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 RASA4O43374 803 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 SNX3O60493 162 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 FAM155BO75949 473 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 IQCF3P0C7M6 154 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 PDGFRAP16234 1089 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 CYP3A5P20815 502 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 MAGEA6P43360 314 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 PTPN9P43378 593 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 CTCFP49711 727 aaPredicted RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 VPS41P49754 854 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 LIG3P49916 1009 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 NDST1P52848 882 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 EIF3EP60228 445 aaKnown RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 IGBP1P78318 339 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 OTUD4Q01804 1114 aaKnown RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 SLC6A3Q01959 620 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 ROR1Q01973 937 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 CCDC15Q0P6D6 951 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 ACVR2BQ13705 512 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 SPARCL1Q14515 664 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 NOMO1Q15155 1222 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 ZBTB6Q15916 424 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 FAM110CQ1W6H9 321 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 ATP13A4Q4VNC1 1196 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 ANKRD20A8PQ5CZ79 823 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 EFHC2Q5JST6 749 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 SPDYAQ5MJ70 313 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 FAM102AQ5T9C2 384 aaPredicted RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 LGSNQ5TDP6 509 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 VSTM1Q6UX27 236 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 DPH6Q7L8W6 267 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 PLEKHH3Q7Z736 793 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 TRABD2AQ86V40 505 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 RFX6Q8HWS3 928 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 LRRC34Q8IZ02 419 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 KIAA0319LQ8IZA0 1049 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 CRYBG2Q8N1P7 616 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 NAT8LQ8N9F0 302 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 OR6J1Q8NGC5 347 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 ACTL9Q8TC94 416 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 MAGEC3Q8TD91 643 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 COPS5Q92905 334 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 FAM84AQ96KN4 292 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 HSFY1Q96LI6 401 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 ZNF560Q96MR9 790 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 FERMT1Q9BQL6 677 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 SDCBP2Q9H190 292 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 SMYD3Q9H7B4 428 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 ZWILCHQ9H900 591 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 GPBP1L1Q9HC44 474 aaPredicted RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 GBA2Q9HCG7 927 aaPredicted RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 METTL5Q9NRN9 209 aaKnown RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 RCOR3Q9P2K3 495 aaPredicted RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 PSMC3IPQ9P2W1 217 aaPredicted RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 UBQLN1Q9UMX0 589 aaKnown RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 CAPN7Q9Y6W3 813 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 OTOFQ9HC10 1997 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 FAM170AA1A519 330 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 BCLAF3A2AJT9 711 aaKnown RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 MBLAC1A4D2B0 266 aaPredicted RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 A6NJR5 290 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 TM9SF1O15321 606 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 PEX10O60683 326 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 KPNA6O60684 536 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 GJB6O95452 261 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 SNAI1O95863 264 aaPredicted RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 OAS1P00973 400 aaKnown RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 MMP3P08254 477 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 GNAT1P11488 350 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 KCNE1P15382 129 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 PAX3P23760 479 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 ALDH3A1P30838 453 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 SDC4P31431 198 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 SKIV2L2P42285 1042 aaKnown RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 RPL34P49207 117 aaKnown RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 CDH8P55286 799 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 SLC8A3P57103 927 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 RNASELQ05823 741 aaKnown RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 PDIA2Q13087 525 aaKnown RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 DPYSL3Q14195 570 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 KRT81Q14533 505 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 QPCTQ16769 361 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 CCDC38Q502W7 563 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 PKDCCQ504Y2 493 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 RNF43Q68DV7 783 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 OR6B2Q6IFH4 312 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 ALKAL1Q6UXT8 129 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 TRPM8Q7Z2W7 1104 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 CDKL3Q8IVW4 592 aaPredicted RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 PALM2Q8IXS6 379 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 ZBED8Q8IZ13 594 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 ARFGAP1Q8N6T3 406 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 MCUQ8NE86 351 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 JOSD2Q8TAC2 188 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 UHMK1Q8TAS1 419 aaKnown RBP8.68□□□□□ -1.02
SPG11-209ENST00000558253 SPATA18Q8TC71 538 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 ZNF398Q8TD17 642 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 SLC35F5Q8WV83 523 aa8.68□□□□□ -1.02
SPG11-209ENST00000558253 RXFP2Q8WXD0 754 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms