RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 SLC9A3R1O14745 358 aaPredicted RBP10.73□□□□□ -0.69
USP3-207ENST00000558218 HLA-DRAP01903 254 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 CKMP06732 381 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 YWHAQP27348 245 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 CNR2P34972 360 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 TUBP50607 506 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 LRRC63Q05C16 580 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 INCA1Q0VD86 236 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 GRSF1Q12849 480 aaKnown RBP eCLIP10.73□□□□□ -0.69
USP3-207ENST00000558218 TAF10Q12962 218 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 CCINQ13939 588 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 MTF1Q14872 753 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 ZNF77Q15935 545 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 CCDC142Q17RM4 750 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 FBXO43Q4G163 708 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 TMEM196Q5HYL7 178 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 KRT39Q6A163 491 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 FOXR2Q6PJQ5 311 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 PAQR9Q6ZVX9 377 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 DDX42Q86XP3 938 aaKnown RBP eCLIP10.73□□□□□ -0.69
USP3-207ENST00000558218 CPA6Q8N4T0 437 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 GPR161Q8N6U8 529 aaKnown RBP10.73□□□□□ -0.69
USP3-207ENST00000558218 ARL14EPQ8N8R7 260 aaPredicted RBP10.73□□□□□ -0.69
USP3-207ENST00000558218 STKLD1Q8NE28 680 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 ATP2A3Q93084 1043 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 SMARCE1Q969G3 411 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 ZFYVE19Q96K21 471 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 CYP2S1Q96SQ9 504 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 TSG101Q99816 390 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 DUSP9Q99956 384 aaKnown RBP10.73□□□□□ -0.69
USP3-207ENST00000558218 ZNF518BQ9C0D4 1074 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 SMG9Q9H0W8 520 aaKnown RBP10.73□□□□□ -0.69
USP3-207ENST00000558218 DPEP3Q9H4B8 488 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 FBXO44Q9H4M3 255 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 SMYD3Q9H7B4 428 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 DMAP1Q9NPF5 467 aaPredicted RBP10.73□□□□□ -0.69
USP3-207ENST00000558218 HPS4Q9NQG7 708 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 DUS2Q9NX74 493 aaKnown RBP10.73□□□□□ -0.69
USP3-207ENST00000558218 PCDHA5Q9Y5H7 936 aa10.73□□□□□ -0.69
USP3-207ENST00000558218 KIF26AQ9ULI4 1882 aaPredicted RBP10.72□□□□□ -0.69
USP3-207ENST00000558218 C2orf78A6NCI8 922 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 TNFRSF10BO14763 440 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 OAS1P00973 400 aaKnown RBP10.72□□□□□ -0.69
USP3-207ENST00000558218 EPB41P11171 864 aaKnown RBP10.72□□□□□ -0.69
USP3-207ENST00000558218 TDGF1P13385 188 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 DRD1P21728 446 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 PIK3CAP42336 1068 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 PRCPP42785 496 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 ASPAP45381 313 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 GCLMP48507 274 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 IFNAR2P48551 515 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 NDST1P52848 882 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 USP46P62068 366 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 TNK2Q07912 1038 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 PPP3CAQ08209 521 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 USP4Q13107 963 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 PNOCQ13519 176 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 TXNDC11Q6PKC3 985 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 ACOT1Q86TX2 421 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 ZC3H3Q8IXZ2 948 aaKnown RBP10.72□□□□□ -0.69
USP3-207ENST00000558218 FUKQ8N0W3 1084 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 ADSSL1Q8N142 457 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 SUMF1Q8NBK3 374 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 RUBCNQ92622 972 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 DHTKD1Q96HY7 919 aaPredicted RBP10.72□□□□□ -0.69
USP3-207ENST00000558218 SLC22A12Q96S37 553 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 HNRNPABQ99729 332 aaKnown RBP10.72□□□□□ -0.69
USP3-207ENST00000558218 MED10Q9BTT4 135 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 NT5C1AQ9BXI3 368 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 SDCBP2Q9H190 292 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 EBF3Q9H4W6 596 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 ECT2Q9H8V3 914 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 TRPC7Q9HCX4 862 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 PNPLA8Q9NP80 782 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 TBC1D14Q9P2M4 693 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 R4GN57 208 aa10.72□□□□□ -0.69
USP3-207ENST00000558218 CCDC163A0A0D9SF12 145 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 CHURC1-FNTBB4DL54 471 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 CLDN5O00501 218 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 SLC16A3O15427 465 aaKnown RBP10.71□□□□□ -0.69
USP3-207ENST00000558218 NFATC1O95644 943 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 ZDHHC11BP0C7U3 371 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 GJA4P35212 333 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 SOX9P48436 509 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 GALK1P51570 392 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 STIM1Q13586 685 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 PON2Q15165 354 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 EML3Q32P44 896 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 WDR44Q5JSH3 913 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 FAM35AQ86V20 835 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 PARP9Q8IXQ6 854 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 ADGRG2Q8IZP9 1017 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 ZNF276Q8N554 614 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 FBXL13Q8NEE6 735 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 TAS1R2Q8TE23 839 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 SH3RF2Q8TEC5 729 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 SECISBP2LQ93073 1101 aaKnown RBP10.71□□□□□ -0.69
USP3-207ENST00000558218 OTUB2Q96DC9 234 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 KCNK16Q96T55 309 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 P2RY13Q9BPV8 354 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms