RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 C2orf78A6NCI8 922 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 ZNF840PA6NDX5 716 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 LRRC53A6NM62 1247 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 ANHXE9PGG2 379 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 PIK3R2O00459 728 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 ASGR2P07307 311 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 FCARP24071 287 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 DDX6P26196 483 aaKnown RBP eCLIP15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 KRT9P35527 623 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 PGFP49763 221 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 ARID5AQ03989 594 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 E4F1Q66K89 784 aaPredicted RBP15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 PARM1Q6UWI2 310 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 CCDC186Q7Z3E2 898 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 MON1AQ86VX9 555 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 C1orf131Q8NDD1 294 aaKnown RBP15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 RSAD2Q8WXG1 361 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 FGF14Q92915 247 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 NUP58Q9BVL2 599 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 SLC46A2Q9BY10 475 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 ULBP1Q9BZM6 244 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 NMUR1Q9HB89 426 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 MYO6Q9UM54 1294 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 C5orf42Q9H799 3197 aa15.64■□□□□ 0.09
VIPAS39-210ENST00000557466 A0A1W2PQJ5 194 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 PRAMEF12O95522 483 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 ABL1P00519 1130 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 GYPCP04921 128 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 MMEP08473 750 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 USP17L7P0C7H9 530 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 ZDHHC11BP0C7U3 371 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 LCP1P13796 627 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 FERP16591 822 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 CHRNB2P17787 502 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 PPP3CCP48454 512 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 PDCLQ13371 301 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 MTSS1LQ765P7 747 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 BHLHA9Q7RTU4 235 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 RNF135Q8IUD6 432 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 CMTM8Q8IZV2 173 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 SIX6OS1Q8N1H7 587 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 WDTC1Q8N5D0 677 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 NDRG1Q92597 394 aaKnown RBP15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 SMARCD2Q92925 531 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 HSFY1Q96LI6 401 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 SLC22A12Q96S37 553 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 KXD1Q9BQD3 176 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 EDEM3Q9BZQ6 932 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 SMG9Q9H0W8 520 aaKnown RBP15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 LHX5Q9H2C1 402 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 CHORDC1Q9UHD1 332 aaPredicted RBP15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 NUMBLQ9Y6R0 609 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 COL4A2P08572 1712 aa15.63■□□□□ 0.09
VIPAS39-210ENST00000557466 TRAV19A0A0A6YYK7 116 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 A0A1W2PQH9 124 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 SOBPA7XYQ1 873 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 ZBED1O96006 694 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 OAS1P00973 400 aaKnown RBP15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 CDH5P33151 784 aaPredicted RBP15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 RPL34P49207 117 aaKnown RBP15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 FMO1Q01740 532 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 CDR2Q01850 454 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 ASIC2Q16515 512 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 SNX30Q5VWJ9 437 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 SCD5Q86SK9 330 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 ZNF677Q86XU0 584 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 ARID3BQ8IVW6 561 aaPredicted RBP15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 VSTM4Q8IW00 320 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 ARL14EPQ8N8R7 260 aaPredicted RBP15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 STK32AQ8WU08 396 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 RSPRY1Q96DX4 576 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 RPP25Q9BUL9 199 aaKnown RBP15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 SLC4A5Q9BY07 1137 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 TRIM5Q9C035 493 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 PDCL3Q9H2J4 239 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 KCNK12Q9HB15 430 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 TRPV4Q9HBA0 871 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 TLR8Q9NR97 1041 aaKnown RBP15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 ST7Q9NRC1 585 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 OSER1Q9NX31 292 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 IGSF9Q9P2J2 1179 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 TJP2Q9UDY2 1190 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 ZMYM5Q9UJ78 669 aa15.62■□□□□ 0.09
VIPAS39-210ENST00000557466 FAM170AA1A519 330 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 E5RJQ4 531 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 OLFM2O95897 454 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 CKMP06732 381 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 WEE1P30291 646 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 VIPR2P41587 438 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 DAOAP59103 153 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 SFMBT2Q5VUG0 894 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 SPECC1LQ69YQ0 1117 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 PM20D1Q6GTS8 502 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 TANGO2Q6ICL3 276 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 IRF2BP2Q7Z5L9 587 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 SCML4Q8N228 414 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 CLEC4CQ8WTT0 213 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 CPLX3Q8WVH0 158 aa15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 USP13Q92995 863 aaPredicted RBP15.61■□□□□ 0.09
VIPAS39-210ENST00000557466 IQCDQ96DY2 449 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms