RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 BRWD3Q6RI45 1802 aa7.48□□□□□ -1.21
LINC00871-204ENST00000556886 COL5A3P25940 1745 aaPredicted RBP7.47□□□□□ -1.21
LINC00871-204ENST00000556886 AKAP11Q9UKA4 1901 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 ZNF213O14771 459 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 GPAA1O43292 621 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 NCR1O76036 304 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 FGAP02671 866 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 SMARCA1P28370 1054 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 NOMO3P69849 1222 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 ITPK1Q13572 414 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 UBE4AQ14139 1066 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 MLC1Q15049 377 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 NOMO2Q5JPE7 1267 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 FNDC7Q5VTL7 733 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 IGFL4Q6B9Z1 124 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 DBX2Q6ZNG2 339 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 FITM2Q8N6M3 262 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 NECAB1Q8N987 351 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 TRIM44Q96DX7 344 aaPredicted RBP7.47□□□□□ -1.21
LINC00871-204ENST00000556886 PDLIM2Q96JY6 352 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 CGRRF1Q99675 332 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 SLC46A2Q9BY10 475 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 NYXQ9GZU5 481 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 TSPY26PQ9H489 355 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 KLHL11Q9NVR0 708 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 GPRC5BQ9NZH0 403 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 SLC45A2Q9UMX9 530 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 NIP7Q9Y221 180 aaKnown RBP eCLIP7.47□□□□□ -1.21
LINC00871-204ENST00000556886 ATP11BQ9Y2G3 1177 aa7.47□□□□□ -1.21
LINC00871-204ENST00000556886 BCORQ6W2J9 1755 aa7.46□□□□□ -1.21
LINC00871-204ENST00000556886 CCDC78A2IDD5 438 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 VPS37CA5D8V6 355 aaPredicted RBP7.46□□□□□ -1.22
LINC00871-204ENST00000556886 SLC43A1O75387 559 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 ARIH2O95376 493 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 SPATA31D3P0C874 917 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 MYBP10242 640 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 PRDX5P30044 214 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 PDIA3P30101 505 aaKnown RBP7.46□□□□□ -1.22
LINC00871-204ENST00000556886 NT5C2P49902 561 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 TRDNQ13061 729 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 CCDC157Q569K6 752 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 UTP14CQ5TAP6 766 aaKnown RBP7.46□□□□□ -1.22
LINC00871-204ENST00000556886 CRIP3Q6Q6R5 217 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 SPATA31D4Q6ZUB0 917 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 ZNF365Q70YC5 407 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 MB21D2Q8IYB1 491 aaPredicted RBP7.46□□□□□ -1.22
LINC00871-204ENST00000556886 MYO1HQ8N1T3 1032 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 SYNE4Q8N205 404 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 SH2D3CQ8N5H7 860 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 CAMKK1Q8N5S9 505 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 SPATA5Q8NB90 893 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 NSUN7Q8NE18 718 aaKnown RBP7.46□□□□□ -1.22
LINC00871-204ENST00000556886 PPP1R35Q8TAP8 253 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 ACO2Q99798 780 aaKnown RBP7.46□□□□□ -1.22
LINC00871-204ENST00000556886 ZSWIM1Q9BR11 485 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 C1orf43Q9BWL3 253 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 PANK2Q9BZ23 570 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 REXO4Q9GZR2 422 aaKnown RBP7.46□□□□□ -1.22
LINC00871-204ENST00000556886 AKIP1Q9NQ31 210 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 GNL3LQ9NVN8 582 aaKnown RBP7.46□□□□□ -1.22
LINC00871-204ENST00000556886 JKAMPQ9P055 326 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 NARFQ9UHQ1 456 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 CNPY2Q9Y2B0 182 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 PDS5AQ29RF7 1337 aaKnown RBP7.46□□□□□ -1.22
LINC00871-204ENST00000556886 SALL1Q9NSC2 1324 aa7.46□□□□□ -1.22
LINC00871-204ENST00000556886 LAMA4Q16363 1823 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 SYCE3A1L190 88 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 NPIPB8E9PQR5 432 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 H3BQV1 296 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 RNASET2O00584 256 aaKnown RBP7.45□□□□□ -1.22
LINC00871-204ENST00000556886 AGFG2O95081 481 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 CAVIN2O95810 425 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 PEX11BO96011 259 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 FTH1P19P0C7X4 201 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 CKBP12277 381 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 PHKA1P46020 1223 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 RCAN1P53805 252 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 RESTQ13127 1097 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 CCDC93Q567U6 631 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 SLC9C2Q5TAH2 1124 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 CPLX2Q6PUV4 134 aaKnown RBP7.45□□□□□ -1.22
LINC00871-204ENST00000556886 LRRC55Q6ZSA7 311 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 DENND1CQ8IV53 801 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 ANKRD18AQ8IVF6 992 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 FMNL3Q8IVF7 1028 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 MARS2Q96GW9 593 aaKnown RBP7.45□□□□□ -1.22
LINC00871-204ENST00000556886 ZNF396Q96N95 335 aaPredicted RBP7.45□□□□□ -1.22
LINC00871-204ENST00000556886 STRBPQ96SI9 672 aaKnown RBP7.45□□□□□ -1.22
LINC00871-204ENST00000556886 NRDE2Q9H7Z3 1164 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 DDX19AQ9NUU7 478 aaKnown RBP7.45□□□□□ -1.22
LINC00871-204ENST00000556886 SIDT1Q9NXL6 827 aaKnown RBP7.45□□□□□ -1.22
LINC00871-204ENST00000556886 USP25Q9UHP3 1055 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 FEZ2Q9UHY8 353 aaPredicted RBP7.45□□□□□ -1.22
LINC00871-204ENST00000556886 REXO2Q9Y3B8 237 aaKnown RBP7.45□□□□□ -1.22
LINC00871-204ENST00000556886 ZNF804BA4D1E1 1349 aa7.45□□□□□ -1.22
LINC00871-204ENST00000556886 TCHHQ07283 1943 aa7.44□□□□□ -1.22
LINC00871-204ENST00000556886 MYH14Q7Z406 1995 aaKnown RBP7.44□□□□□ -1.22
LINC00871-204ENST00000556886 DDX60Q8IY21 1712 aaKnown RBP7.44□□□□□ -1.22
LINC00871-204ENST00000556886 DOCK2Q92608 1830 aa7.44□□□□□ -1.22
LINC00871-204ENST00000556886 A0A1B0GTW7 788 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms