RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 KCNH6Q9H252 994 aa24.13■■□□□ 1.45
TDP1-216ENST00000556867 APEX2Q9UBZ4 518 aa24.13■■□□□ 1.45
TDP1-216ENST00000556867 CHORDC1Q9UHD1 332 aaPredicted RBP24.13■■□□□ 1.45
TDP1-216ENST00000556867 KANSL1LA0AUZ9 987 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 STK25O00506 426 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 GLULP15104 373 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 PON1P27169 355 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 NUBP1P53384 320 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 MFAP3P55082 362 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 MLLT6P55198 1093 aaPredicted RBP24.12■■□□□ 1.45
TDP1-216ENST00000556867 SLC8A3P57103 927 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 TYRO3Q06418 890 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 MTF1Q14872 753 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 CSGALNACT1Q8TDX6 532 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 SH3RF2Q8TEC5 729 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 TFAP2BQ92481 460 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 FAM83CQ9BQN1 747 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 RNF38Q9H0F5 515 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 HESX1Q9UBX0 185 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 RAPGEFL1Q9UHV5 662 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 USP3Q9Y6I4 520 aa24.12■■□□□ 1.45
TDP1-216ENST00000556867 SHISA7A6NL88 538 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 PI15O43692 258 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 MYL5Q02045 173 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 BST2Q10589 180 aaKnown RBP24.11■■□□□ 1.45
TDP1-216ENST00000556867 HECTD3Q5T447 861 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 SMYD5Q6GMV2 418 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 LCLAT1Q6UWP7 414 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 CCDC186Q7Z3E2 898 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 PIGZQ86VD9 579 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 PJA1Q8NG27 643 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 MSANTD3Q96H12 275 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 FOXQ1Q9C009 403 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 TLR8Q9NR97 1041 aaKnown RBP24.11■■□□□ 1.45
TDP1-216ENST00000556867 GKN1Q9NS71 199 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 ARIH1Q9Y4X5 557 aaPredicted RBP24.11■■□□□ 1.45
TDP1-216ENST00000556867 PIAS3Q9Y6X2 628 aa24.11■■□□□ 1.45
TDP1-216ENST00000556867 MAN2B1O00754 1011 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 XPO1O14980 1071 aaKnown RBP24.1■■□□□ 1.45
TDP1-216ENST00000556867 CYP26A1O43174 497 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 COCHO43405 550 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 SETSIPP0DME0 302 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 PDE4CQ08493 712 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 STILQ15468 1287 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 CNGA2Q16280 664 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 KLHL40Q2TBA0 621 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 PKDCCQ504Y2 493 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 RAB41Q5JT25 222 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 CC2D1AQ6P1N0 951 aaPredicted RBP24.1■■□□□ 1.45
TDP1-216ENST00000556867 GJB7Q6PEY0 223 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 ZNF852Q6ZMS4 543 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 ZSWIM1Q9BR11 485 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 OSBPL6Q9BZF3 934 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 C8orf33Q9H7E9 229 aaPredicted RBP24.1■■□□□ 1.45
TDP1-216ENST00000556867 LTB4R2Q9NPC1 389 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 SIX2Q9NPC8 291 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.1■■□□□ 1.45
TDP1-216ENST00000556867 SIT1Q9Y3P8 196 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 CPQQ9Y646 472 aa24.1■■□□□ 1.45
TDP1-216ENST00000556867 KRT5P13647 590 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 PTMSP20962 102 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 BRD2P25440 801 aaKnown RBP24.09■■□□□ 1.45
TDP1-216ENST00000556867 PGFP49763 221 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 ZXDBP98169 803 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 APBA1Q02410 837 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 TNK2Q07912 1038 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 PDGFRLQ15198 375 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 KIAA1958Q8N8K9 716 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 PRRX2Q99811 253 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 CCSER2Q9H7U1 834 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 CYLDQ9NQC7 956 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 HPS4Q9NQG7 708 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 FANCLQ9NW38 375 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 TAB2Q9NYJ8 693 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 GTSE1Q9NYZ3 720 aa24.09■■□□□ 1.45
TDP1-216ENST00000556867 MRPS17Q9Y2R5 130 aaKnown RBP24.09■■□□□ 1.45
TDP1-216ENST00000556867 LEFTY2O00292 366 aa24.08■■□□□ 1.45
TDP1-216ENST00000556867 MBL2P11226 248 aaPredicted RBP24.08■■□□□ 1.45
TDP1-216ENST00000556867 CD72P21854 359 aa24.08■■□□□ 1.45
TDP1-216ENST00000556867 PLA2G4AP47712 749 aa24.08■■□□□ 1.45
TDP1-216ENST00000556867 KRT31Q15323 416 aa24.08■■□□□ 1.45
TDP1-216ENST00000556867 ITPRIPL2Q3MIP1 535 aa24.08■■□□□ 1.45
TDP1-216ENST00000556867 C1orf228Q6PIY5 440 aa24.08■■□□□ 1.45
TDP1-216ENST00000556867 DDX42Q86XP3 938 aaKnown RBP eCLIP24.08■■□□□ 1.45
TDP1-216ENST00000556867 CCDC105Q8IYK2 499 aa24.08■■□□□ 1.45
TDP1-216ENST00000556867 SHC3Q92529 594 aa24.08■■□□□ 1.45
TDP1-216ENST00000556867 NELL2Q99435 816 aa24.08■■□□□ 1.45
TDP1-216ENST00000556867 NMUR1Q9HB89 426 aa24.08■■□□□ 1.45
TDP1-216ENST00000556867 CACNA1HO95180 2353 aa24.08■■□□□ 1.44
TDP1-216ENST00000556867 WDFY4Q6ZS81 3184 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 TULP2O00295 520 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 PES1O00541 588 aaKnown RBP24.07■■□□□ 1.44
TDP1-216ENST00000556867 TLR5O60602 858 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 TARSP26639 723 aaKnown RBP24.07■■□□□ 1.44
TDP1-216ENST00000556867 PSEN1P49768 467 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 KPNA1P52294 538 aaPredicted RBP24.07■■□□□ 1.44
TDP1-216ENST00000556867 UBXN2BQ14CS0 331 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 TRIM68Q6AZZ1 485 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 DPY19L2P1Q6NXN4 242 aa24.07■■□□□ 1.44
TDP1-216ENST00000556867 UBA3Q8TBC4 463 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms