RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ZFYVE19Q96K21 471 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 MKNK1Q9BUB5 465 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 NACA2Q9H009 215 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 SMG9Q9H0W8 520 aaKnown RBP7.78□□□□□ -1.16
SCFD1-222ENST00000556768 MTCL1Q9Y4B5 1905 aaKnown RBP7.78□□□□□ -1.16
SCFD1-222ENST00000556768 ARNTLO00327 626 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 HCRTO43612 131 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 ATG13O75143 517 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 AKAP3O75969 853 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 YWHAQP27348 245 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 PPP1R2P41236 205 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 GCLMP48507 274 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 IFNAR2P48551 515 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 MMP16P51512 607 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 CDH8P55286 799 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 SLC8A3P57103 927 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 DLG4P78352 724 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 FKBP3Q00688 224 aaKnown RBP7.78□□□□□ -1.16
SCFD1-222ENST00000556768 TNK2Q07912 1038 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 MTF1Q14872 753 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 OXLD1Q5BKU9 147 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 KRT39Q6A163 491 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 SCARA5Q6ZMJ2 495 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 TMEM150AQ86TG1 271 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 ADSSL1Q8N142 457 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 CPA6Q8N4T0 437 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 FAM160A2Q8N612 972 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-222ENST00000556768 TPCN2Q8NHX9 752 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 RSPRY1Q96DX4 576 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 SMARCD1Q96GM5 515 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 TIGD1Q96MW7 591 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 CYP2S1Q96SQ9 504 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 FAM83CQ9BQN1 747 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 CHRDQ9H2X0 955 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 GOLPH3LQ9H4A5 285 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 EBF3Q9H4W6 596 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 MMRN2Q9H8L6 949 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 CYP3A43Q9HB55 503 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 DMAP1Q9NPF5 467 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-222ENST00000556768 ZSCAN32Q9NX65 697 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 DUS2Q9NX74 493 aaKnown RBP7.78□□□□□ -1.16
SCFD1-222ENST00000556768 RAB23Q9ULC3 237 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 CCL26Q9Y258 94 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 PCDHB3Q9Y5E6 796 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 PCDHGA11Q9Y5H2 935 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 R4GN57 208 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 C2orf16Q68DN1 1984 aa7.78□□□□□ -1.16
SCFD1-222ENST00000556768 SLC9A3R1O14745 358 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-222ENST00000556768 PSMA7O14818 248 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 ASS1P00966 412 aaKnown RBP7.77□□□□□ -1.17
SCFD1-222ENST00000556768 HLA-DRAP01903 254 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 CHRNB1P11230 501 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 CETN1Q12798 172 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 IFRD2Q12894 506 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-222ENST00000556768 TAF10Q12962 218 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 PNOCQ13519 176 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 ZNF658Q5TYW1 1059 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-222ENST00000556768 TCERG1LQ5VWI1 586 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 ASCL5Q7RTU5 278 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 ACOT1Q86TX2 421 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 DDX42Q86XP3 938 aaKnown RBP eCLIP7.77□□□□□ -1.17
SCFD1-222ENST00000556768 FMR1NBQ8N0W7 255 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-222ENST00000556768 SPEM1Q8N4L4 309 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 ARL14EPQ8N8R7 260 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-222ENST00000556768 OSCP1Q8WVF1 389 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 SREK1Q8WXA9 508 aaKnown RBP7.77□□□□□ -1.17
SCFD1-222ENST00000556768 OVCA2Q8WZ82 227 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 LRRC3BQ96PB8 259 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 NT5C1AQ9BXI3 368 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 ZNF518BQ9C0D4 1074 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 DPEP3Q9H4B8 488 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 FBXO44Q9H4M3 255 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 SMYD3Q9H7B4 428 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 TMEM8AQ9HCN3 771 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 SEPT3Q9UH03 358 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 DNMT3AQ9Y6K1 912 aaPredicted RBP7.77□□□□□ -1.17
SCFD1-222ENST00000556768 DENND4AQ7Z401 1863 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 TRIP11Q15643 1979 aa7.77□□□□□ -1.17
SCFD1-222ENST00000556768 F5P12259 2224 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 ZNF840PA6NDX5 716 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 CLDN5O00501 218 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 VNN1O95497 513 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 NFATC1O95644 943 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 DRD1P21728 446 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 SOX9P48436 509 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 NDST1P52848 882 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 LRRC63Q05C16 580 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 PON2Q15165 354 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 CCDC142Q17RM4 750 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 FBXO43Q4G163 708 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 CRYBG2Q8N1P7 616 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 FBXL13Q8NEE6 735 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 PLEKHO2Q8TD55 490 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 SH3RF2Q8TEC5 729 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 RUBCNQ92622 972 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 FBXO32Q969P5 355 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 EEF2KMTQ96G04 330 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 FAXDC2Q96IV6 333 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 TTLL2Q9BWV7 592 aa7.76□□□□□ -1.17
SCFD1-222ENST00000556768 B3GNT5Q9BYG0 378 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms