RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 CXCL12P48061 93 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 CCR3P51677 355 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 JAK3P52333 1124 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 PRKCEQ02156 737 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 NUCB1Q02818 461 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 CHRNEQ04844 493 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 DSC1Q08554 894 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 NCBP1Q09161 790 aaKnown RBP5.37□□□□□ -1.55
ATXN3-239ENST00000556315 IFRD2Q12894 506 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-239ENST00000556315 PRR16Q569H4 304 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 PPM1LQ5SGD2 360 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 LIN9Q5TKA1 542 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 MRM1Q6IN84 353 aaKnown RBP5.37□□□□□ -1.55
ATXN3-239ENST00000556315 RTL10Q7L3V2 364 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 TMC3Q7Z5M5 1100 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 SRGAP1Q7Z6B7 1085 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 EXOC8Q8IYI6 725 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 ZNF655Q8N720 491 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-239ENST00000556315 ANKS4BQ8N8V4 417 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 ITFG1Q8TB96 612 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 DNASE1L2Q92874 299 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 MAP4K1Q92918 833 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 ZNF669Q96BR6 464 aaPredicted RBP5.37□□□□□ -1.55
ATXN3-239ENST00000556315 C20orf173Q96LM9 149 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 DEPDC7Q96QD5 511 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 SRPK1Q96SB4 655 aaKnown RBP5.37□□□□□ -1.55
ATXN3-239ENST00000556315 GAD1Q99259 594 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 RIT2Q99578 217 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 KXD1Q9BQD3 176 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 G6PC3Q9BUM1 346 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 HDAC8Q9BY41 377 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 IL25Q9H293 177 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 ZSWIM4Q9H7M6 989 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 LMAN1LQ9HAT1 526 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 IFT122Q9HBG6 1241 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 GCM1Q9NP62 436 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 AGPAT5Q9NUQ2 364 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 RBM28Q9NW13 759 aaKnown RBP5.37□□□□□ -1.55
ATXN3-239ENST00000556315 GFOD1Q9NXC2 390 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 BARHL2Q9NY43 387 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 GDE1Q9NZC3 331 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 FHOD1Q9Y613 1164 aa5.37□□□□□ -1.55
ATXN3-239ENST00000556315 KAT6AQ92794 2004 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 SPTBN2O15020 2390 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 TEX51A0A1B0GUA7 166 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 SHISA3A0PJX4 238 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 ARL5CA6NH57 179 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 NOTOA8MTQ0 251 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 CCL16O15467 120 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 GAS7O60861 476 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 STBD1O95210 358 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 PRAMEF1O95521 474 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 RPL17P18621 184 aaKnown RBP5.36□□□□□ -1.55
ATXN3-239ENST00000556315 HOXA5P20719 270 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 ZNF445P59923 1031 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 NTHL1P78549 312 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 DUSP4Q13115 394 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 PCBP1Q15365 356 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATXN3-239ENST00000556315 SV2CQ496J9 727 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 MTERF2Q49AM1 385 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 UBXN11Q5T124 520 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 FUT10Q6P4F1 479 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-239ENST00000556315 ZNF605Q86T29 641 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 SGMS1Q86VZ5 419 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 LONP2Q86WA8 852 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 RAB11FIP4Q86YS3 637 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 RDM1Q8NG50 284 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 ELSPBP1Q96BH3 223 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 MRFAP1L1Q96HT8 127 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 RCC1LQ96I51 464 aaKnown RBP5.36□□□□□ -1.55
ATXN3-239ENST00000556315 B3GALT6Q96L58 329 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 NLRP4Q96MN2 994 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 CEP89Q96ST8 783 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 TEKT3Q9BXF9 490 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 C6orf50Q9HD87 102 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 HEBP1Q9NRV9 189 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 MIOSQ9NXC5 875 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 SNTG2Q9NY99 539 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 DNMT3BQ9UBC3 853 aaKnown RBP5.36□□□□□ -1.55
ATXN3-239ENST00000556315 SUSD2Q9UGT4 822 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 FBXW11Q9UKB1 542 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 ADAM28Q9UKQ2 775 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 GIT1Q9Y2X7 761 aa5.36□□□□□ -1.55
ATXN3-239ENST00000556315 SF3B6Q9Y3B4 125 aaKnown RBP5.36□□□□□ -1.55
ATXN3-239ENST00000556315 MRPS23Q9Y3D9 190 aaKnown RBP5.36□□□□□ -1.55
ATXN3-239ENST00000556315 FNDC1Q4ZHG4 1894 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-239ENST00000556315 DMXL1Q9Y485 3027 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 KIAA1671Q9BY89 1806 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 SSU72P8A0A1W2PR75 194 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 ESYT2A0FGR8 921 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 TMEM8BA6NDV4 472 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 SHISA7A6NL88 538 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 F8W810 466 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 MSH4O15457 936 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 ASAP2O43150 1006 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 CHMP2AO43633 222 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 PSPNO60542 156 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 KCNK5O95279 499 aa5.35□□□□□ -1.55
ATXN3-239ENST00000556315 GSNP06396 782 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms