RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 GPNMBQ14956 572 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 EMC2Q15006 297 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 TARBP2Q15633 366 aaKnown RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 RAB30Q15771 203 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 IL17AQ16552 155 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 TCTN1Q2MV58 587 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 LRIT3Q3SXY7 679 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 PAN2Q504Q3 1202 aaKnown RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 PLEKHG4Q58EX7 1191 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 FBXO47Q5MNV8 452 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 STEAP3Q658P3 488 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 HAUS3Q68CZ6 603 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 TSHZ1Q6ZSZ6 1077 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 CATSPER4Q7RTX7 472 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 HERC6Q8IVU3 1022 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 C4orf19Q8IY42 314 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 C4orf32Q8N8J7 132 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 BHLHE22Q8NFJ8 381 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 SLC7A14Q8TBB6 771 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 ARNTL2Q8WYA1 636 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 APBB2Q92870 758 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 TIFAQ96CG3 184 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 MAGEB10Q96LZ2 347 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 YME1L1Q96TA2 773 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 ADAM2Q99965 735 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 HSD17B14Q9BPX1 270 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 POLR3CQ9BUI4 534 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 INO80BQ9C086 356 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 BHMT2Q9H2M3 363 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 PRO3102Q9H379 93 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 ZSCAN16Q9H4T2 348 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 IPPKQ9H8X2 491 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 AGO3Q9H9G7 860 aaKnown RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 TUFT1Q9NNX1 390 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 ANKEF1Q9NU02 776 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 WRAP73Q9P2S5 460 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 SMG5Q9UPR3 1016 aaKnown RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 MTMR6Q9Y217 621 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 IGSF9BQ9UPX0 1349 aa5.13□□□□□ -1.59
ATXN3-237ENST00000556274 ZNF638Q14966 1978 aaKnown RBP5.13□□□□□ -1.59
ATXN3-237ENST00000556274 PDCD11Q14690 1871 aaKnown RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 INO80B-WBP1J3KQ70 363 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 KRIT1O00522 736 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 PPP1R12AO14974 1030 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 ASAP2O43150 1006 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 CAND2O75155 1236 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 GPR32O75388 356 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 BAIAP3O94812 1187 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 ERLIN2O94905 339 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 STBD1O95210 358 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 ASMTLO95671 621 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 TSPAN15O95858 294 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 CXCL10P02778 98 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 KRT1P04264 644 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 RPLP2P05387 115 aaKnown RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 CA3P07451 260 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 STAG3L1P0CL83 205 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 COL6A2P12110 1019 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 XRCC6P12956 609 aaKnown RBP eCLIP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 PFKLP17858 780 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 NAT1P18440 290 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 RPA1P27694 616 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 CA8P35219 290 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 MATR3P43243 847 aaKnown RBP eCLIP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 GPC3P51654 580 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 SMAD3P84022 425 aaKnown RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 ATP2C1P98194 919 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 SPIRE1Q08AE8 756 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 MGAT3Q09327 533 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 RESTQ13127 1097 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 ORC2Q13416 577 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 BTG3Q14201 252 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 RRAGBQ5VZM2 374 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 TWF2Q6IBS0 349 aaKnown RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 EP400NLQ6ZTU2 488 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 RTN4RL1Q86UN2 441 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 ZC3H7AQ8IWR0 971 aaKnown RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 PDILTQ8N807 584 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 USP38Q8NB14 1042 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 RNF149Q8NC42 400 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 PIP4K2CQ8TBX8 421 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 NEK9Q8TD19 979 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 PSPC1Q8WXF1 523 aaKnown RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 IFT74Q96LB3 600 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 CLIC6Q96NY7 704 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 APOL6Q9BWW8 343 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 MRPL4Q9BYD3 311 aaKnown RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 CSRNP2Q9H175 543 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 POLR3FQ9H1D9 316 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 PRDM12Q9H4Q4 367 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 ATP6V0A4Q9HBG4 840 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 CATSPERZQ9NTU4 200 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 SFMBT1Q9UHJ3 866 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 PLA2G2DQ9UNK4 145 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 INSL6Q9Y581 213 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 COL4A3BPQ9Y5P4 624 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 IRAK3Q9Y616 596 aa5.12□□□□□ -1.59
ATXN3-237ENST00000556274 MRPL42Q9Y6G3 142 aaKnown RBP5.12□□□□□ -1.59
ATXN3-237ENST00000556274 ATG2AQ2TAZ0 1938 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms