RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 TMEM39AQ9NV64 488 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 PCSK1NQ9UHG2 260 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 DSEQ9UL01 958 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 DRG1Q9Y295 367 aaKnown RBP15.41■□□□□ 0.06
VPS33B-205ENST00000556096 TRIM43BA6NCK2 446 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 LIASO43766 372 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 B3GAT3O94766 335 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 ENDOD1O94919 500 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 SYF2O95926 243 aaKnown RBP15.4■□□□□ 0.06
VPS33B-205ENST00000556096 ITGB8P26012 769 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 C15orf59Q2T9L4 293 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-205ENST00000556096 BOLA3Q53S33 107 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 MDH1BQ5I0G3 518 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 KCNT1Q5JUK3 1230 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 EFHC1Q5JVL4 640 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 SPDYCQ5MJ68 293 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 KAZNQ674X7 775 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 GLB1LQ6UWU2 654 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 CYP4V2Q6ZWL3 525 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-205ENST00000556096 PIGZQ86VD9 579 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 METTL23Q86XA0 190 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 KCTD6Q8NC69 237 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 TEKT4Q8WW24 435 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 LINC01599Q8WXQ3 324 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 TRIM43Q96BQ3 446 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-205ENST00000556096 CFAP57Q96MR6 1250 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 WHRNQ9P202 907 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 INPP5FQ9Y2H2 1132 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 NEU2Q9Y3R4 380 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 TDRD15B5MCY1 1934 aaKnown RBP15.4■□□□□ 0.06
VPS33B-205ENST00000556096 CLDN5O00501 218 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 PRPSAP2O60256 369 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 FAM200BP0CF97 657 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 LCP1P13796 627 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 CYP2C18P33260 490 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 GGCXP38435 758 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 MTMR3Q13615 1198 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 SMTNL2Q2TAL5 461 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 CFAP58Q5T655 872 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 SH3PXD2AQ5TCZ1 1133 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 CLEC20AQ6ZU45 233 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 BBS12Q6ZW61 710 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 TMC3Q7Z5M5 1100 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 TTC13Q8NBP0 860 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 MYCBPAPQ8TBZ2 947 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 CENPIQ92674 756 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-205ENST00000556096 ART4Q93070 314 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 ACSF2Q96CM8 615 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-205ENST00000556096 PEBP4Q96S96 227 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 TBCBQ99426 244 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 ACBD6Q9BR61 282 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 MED10Q9BTT4 135 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 C11orf84Q9BUA3 381 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-205ENST00000556096 DDX23Q9BUQ8 820 aaKnown RBP15.4■□□□□ 0.06
VPS33B-205ENST00000556096 KANSL3Q9P2N6 904 aa15.4■□□□□ 0.06
VPS33B-205ENST00000556096 TIMM13Q9Y5L4 95 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-205ENST00000556096 TNRC18O15417 2968 aaPredicted RBP15.39■□□□□ 0.05
VPS33B-205ENST00000556096 OPA1O60313 960 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 PPFIA2O75334 1257 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 ITIH2P19823 946 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 ARSEP51690 589 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 PLTPP55058 493 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 CCL23P55773 120 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 BYSLQ13895 437 aaKnown RBP15.39■□□□□ 0.05
VPS33B-205ENST00000556096 VSIG1Q86XK7 387 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 TET1Q8NFU7 2136 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 FBXO25Q8TCJ0 367 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 CLEC4CQ8WTT0 213 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 FAM172AQ8WUF8 416 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 PIK3R5Q8WYR1 880 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 RSPH1Q8WYR4 309 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 NKD2Q969F2 451 aaPredicted RBP15.39■□□□□ 0.05
VPS33B-205ENST00000556096 SUSD3Q96L08 255 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 TOX2Q96NM4 488 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 ZIM3Q96PE6 472 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 SH3GL2Q99962 352 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 TXLNGYQ9BZA5 131 aa15.39■□□□□ 0.05
VPS33B-205ENST00000556096 ELAC1Q9H777 363 aaKnown RBP15.39■□□□□ 0.05
VPS33B-205ENST00000556096 MTRF1LQ9UGC7 380 aaKnown RBP15.39■□□□□ 0.05
VPS33B-205ENST00000556096 MYBPHLA2RUH7 354 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 BEST1O76090 585 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 TYMPP19971 482 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 IBSPP21815 317 aaPredicted RBP15.38■□□□□ 0.05
VPS33B-205ENST00000556096 IVDP26440 423 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 BRCC3P46736 316 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 ATP11AP98196 1134 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 DSC1Q08554 894 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 CALCOCO2Q13137 446 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 PDK2Q15119 407 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 KCTD19Q17RG1 926 aaPredicted RBP15.38■□□□□ 0.05
VPS33B-205ENST00000556096 NOMO2Q5JPE7 1267 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 FAM171BQ6P995 826 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 FAM35AQ86V20 835 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 MAP7D3Q8IWC1 876 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 CCDC89Q8N998 374 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 URGCPQ8TCY9 931 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 HSPH1Q92598 858 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 PCED1BQ96HM7 432 aa15.38■□□□□ 0.05
VPS33B-205ENST00000556096 SCLYQ96I15 445 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms