RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 FSCN3Q9NQT6 498 aa3.41□□□□□ -1.86
MTHFD1-212ENST00000555858 USP22Q9UPT9 525 aa3.41□□□□□ -1.86
MTHFD1-212ENST00000555858 CNTN6Q9UQ52 1028 aa3.41□□□□□ -1.86
MTHFD1-212ENST00000555858 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.41□□□□□ -1.86
MTHFD1-212ENST00000555858 DERAQ9Y315 318 aa3.41□□□□□ -1.86
MTHFD1-212ENST00000555858 RRP7AQ9Y3A4 280 aaKnown RBP3.41□□□□□ -1.86
MTHFD1-212ENST00000555858 SPATA31A3Q5VYP0 1347 aa3.41□□□□□ -1.86
MTHFD1-212ENST00000555858 A0A1B0GTW7 788 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 DIRC3C9JPN6 131 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 F5H0A9 414 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 TSPAN3O60637 253 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 ERN1O75460 977 aaKnown RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 TAF5LO75529 589 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 KRT38O76015 456 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 FARP2O94887 1054 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 GPANK1O95872 356 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 CSF1RP07333 972 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 C1QTNF9P0C862 333 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 TAL1P17542 331 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 FGFR4P22455 802 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 RBL1P28749 1068 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 EPHA3P29320 983 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 MSX2P35548 267 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 KCNC1P48547 511 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 NDUFV1P49821 464 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 PDE6CP51160 858 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 ADAM17P78536 824 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 HSD11B2P80365 405 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 TIAL1Q01085 375 aaKnown RBP eCLIP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 MC2RQ01718 297 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 FOXL1Q12952 345 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 PRKG2Q13237 762 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 HLXQ14774 488 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 KCNA10Q16322 511 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 VMACQ2NL98 169 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 NBPF8Q3BBV2 869 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 ARHGAP40Q5TG30 622 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 NAIF1Q69YI7 327 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 RGS7BPQ6MZT1 257 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 FAM43BQ6ZT52 329 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 SP8Q8IXZ3 490 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 ANKRD35Q8N283 1001 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 TCP11L2Q8N4U5 519 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 RFFLQ8WZ73 363 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 ST8SIA4Q92187 359 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 CENPIQ92674 756 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 ANP32BQ92688 251 aaKnown RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 WDR24Q96S15 920 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 AGXT2Q9BYV1 514 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 GPR63Q9BZJ6 419 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 CHODLQ9H9P2 273 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 OLA1Q9NTK5 396 aaKnown RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 ARHGAP26Q9UNA1 814 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 USP15Q9Y4E8 981 aaPredicted RBP3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 AFG3L2Q9Y4W6 797 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 SLC30A1Q9Y6M5 507 aa3.4□□□□□ -1.87
MTHFD1-212ENST00000555858 COL15A1P39059 1388 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 AATKQ6ZMQ8 1374 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 A0A087X0M5 115 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 PRAMEF33A0A0G2JMD5 474 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 A0A1B0GX30 115 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 A0A1W2PS29 197 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 ANKRD18BA2A2Z9 1011 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 CCDC78A2IDD5 438 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 BTBD11A6QL63 1104 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 GOLGA6L6A8MZA4 724 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 ADM5C9JUS6 153 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 K7ENM7 598 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 LEFTY2O00292 366 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 LAMTOR5O43504 91 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 TRIAP1O43715 76 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 PRAMEF10O60809 474 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 RPP40O75818 363 aaKnown RBP3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 RAD17O75943 681 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 LARGE1O95461 756 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 TSPAN15O95858 294 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 ZSCAN22P10073 491 aaPredicted RBP3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 CD6P30203 668 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 NTSR1P30989 418 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 UQCRC1P31930 480 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 APOBEC3AP31941 199 aaPredicted RBP3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 NPTX2P47972 431 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 GATMP50440 423 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 RBM5P52756 815 aaKnown RBP eCLIP3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 NAP1L1P55209 391 aaKnown RBP3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 RPS7P62081 194 aaKnown RBP3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 HHEXQ03014 270 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 OCA2Q04671 838 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 DYRK1AQ13627 763 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 FHL3Q13643 280 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 CLCA4Q14CN2 919 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 GALNTL6Q49A17 601 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 PREPLQ4J6C6 727 aaPredicted RBP3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 CTXN3Q4LDR2 81 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 GPATCH4Q5T3I0 446 aaKnown RBP3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 RBM20Q5T481 1227 aaKnown RBP3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 NT5DC1Q5TFE4 455 aa3.39□□□□□ -1.87
MTHFD1-212ENST00000555858 CCDC30Q5VVM6 783 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms