RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 SYNPOQ8N3V7 929 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 WHAMMQ8TF30 809 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 EXOC4Q96A65 974 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 CSNK1G1Q9HCP0 422 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 IL37Q9NZH6 218 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 CHMP5Q9NZZ3 219 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 CFAP97Q9P2B7 532 aa19.48■□□□□ 0.71
NEDD1-208ENST00000555806 DMDP11532 3685 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 TRDMT1O14717 391 aaKnown RBP19.47■□□□□ 0.71
NEDD1-208ENST00000555806 SCAMP3O14828 347 aaKnown RBP19.47■□□□□ 0.71
NEDD1-208ENST00000555806 FSTL4Q6MZW2 842 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 CLEC20AQ6ZU45 233 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 DDX42Q86XP3 938 aaKnown RBP eCLIP19.47■□□□□ 0.71
NEDD1-208ENST00000555806 TTC39CQ8N584 583 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 NELFBQ8WX92 580 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 TATDN2Q93075 761 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 CHFRQ96EP1 664 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 FAXDC2Q96IV6 333 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 HEXIM2Q96MH2 286 aaKnown RBP19.47■□□□□ 0.71
NEDD1-208ENST00000555806 CEP63Q96MT8 703 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 ARID3AQ99856 593 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 P2RY13Q9BPV8 354 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 HINFPQ9BQA5 517 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 FAM126AQ9BYI3 521 aaPredicted RBP19.47■□□□□ 0.71
NEDD1-208ENST00000555806 NACA2Q9H009 215 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 LINC00597Q9H2U6 94 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 FBXO44Q9H4M3 255 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 METTL14Q9HCE5 456 aaKnown RBP19.47■□□□□ 0.71
NEDD1-208ENST00000555806 CISHQ9NSE2 258 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 CTNND2Q9UQB3 1225 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 VPS13AQ96RL7 3174 aa19.47■□□□□ 0.71
NEDD1-208ENST00000555806 MYO16Q9Y6X6 1858 aa19.46■□□□□ 0.71
NEDD1-208ENST00000555806 COCHO43405 550 aa19.46■□□□□ 0.71
NEDD1-208ENST00000555806 NRLP54845 237 aa19.46■□□□□ 0.71
NEDD1-208ENST00000555806 MORC3Q14149 939 aa19.46■□□□□ 0.71
NEDD1-208ENST00000555806 NAIF1Q69YI7 327 aaPredicted RBP19.46■□□□□ 0.71
NEDD1-208ENST00000555806 FILIP1Q7Z7B0 1213 aa19.46■□□□□ 0.71
NEDD1-208ENST00000555806 ZBTB44Q8NCP5 570 aa19.46■□□□□ 0.71
NEDD1-208ENST00000555806 NELL1Q92832 810 aa19.46■□□□□ 0.71
NEDD1-208ENST00000555806 CD101Q93033 1021 aa19.46■□□□□ 0.71
NEDD1-208ENST00000555806 SLC35C1Q96A29 364 aa19.46■□□□□ 0.71
NEDD1-208ENST00000555806 CCSER2Q9H7U1 834 aa19.46■□□□□ 0.71
NEDD1-208ENST00000555806 BICDL2A1A5D9 508 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 FAM92AA1XBS5 289 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 PPP1R3GB7ZBB8 358 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 SLC9A3R1O14745 358 aaPredicted RBP19.45■□□□□ 0.7
NEDD1-208ENST00000555806 EGFP01133 1207 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 TDGF1P13385 188 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 ACO1P21399 889 aaKnown RBP19.45■□□□□ 0.7
NEDD1-208ENST00000555806 DRD1P21728 446 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 BMP6P22004 513 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 TUBP50607 506 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 GALK1P51570 392 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 UBE2HP62256 183 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 PPP1R26Q5T8A7 1209 aaPredicted RBP19.45■□□□□ 0.7
NEDD1-208ENST00000555806 SNX30Q5VWJ9 437 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 TTI2Q6NXR4 508 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 GPRIN1Q7Z2K8 1008 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 TLR8Q9NR97 1041 aaKnown RBP19.45■□□□□ 0.7
NEDD1-208ENST00000555806 COQ4Q9Y3A0 265 aa19.45■□□□□ 0.7
NEDD1-208ENST00000555806 ZDHHC11BP0C7U3 371 aa19.44■□□□□ 0.7
NEDD1-208ENST00000555806 STX17P56962 302 aa19.44■□□□□ 0.7
NEDD1-208ENST00000555806 LRMPQ12912 555 aa19.44■□□□□ 0.7
NEDD1-208ENST00000555806 CUL2Q13617 745 aa19.44■□□□□ 0.7
NEDD1-208ENST00000555806 SLC4A11Q8NBS3 891 aa19.44■□□□□ 0.7
NEDD1-208ENST00000555806 TMEM176AQ96HP8 235 aa19.44■□□□□ 0.7
NEDD1-208ENST00000555806 DUSP9Q99956 384 aaKnown RBP19.44■□□□□ 0.7
NEDD1-208ENST00000555806 DUSP16Q9BY84 665 aa19.44■□□□□ 0.7
NEDD1-208ENST00000555806 FBRSL1Q9HCM7 1045 aaKnown RBP19.44■□□□□ 0.7
NEDD1-208ENST00000555806 PNPLA8Q9NP80 782 aa19.44■□□□□ 0.7
NEDD1-208ENST00000555806 SH3BP1Q9Y3L3 701 aa19.44■□□□□ 0.7
NEDD1-208ENST00000555806 HHLA1C9JL84 531 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 CYP26A1O43174 497 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 TLR5O60602 858 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 LILRB5O75023 590 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 RNF40O75150 1001 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 CYP17A1P05093 508 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 ANP32AP39687 249 aaKnown RBP19.43■□□□□ 0.7
NEDD1-208ENST00000555806 FMO5P49326 533 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 RAD23BP54727 409 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 YWHAEP62258 255 aaKnown RBP19.43■□□□□ 0.7
NEDD1-208ENST00000555806 PAK1Q13153 545 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 CAMK4Q16566 473 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 HEATR6Q6AI08 1181 aaKnown RBP19.43■□□□□ 0.7
NEDD1-208ENST00000555806 PKN3Q6P5Z2 889 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 KIAA1958Q8N8K9 716 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 SUMF1Q8NBK3 374 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 FAM124BQ9H5Z6 455 aaPredicted RBP19.43■□□□□ 0.7
NEDD1-208ENST00000555806 C2orf42Q9NWW7 574 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 SCML2Q9UQR0 700 aa19.43■□□□□ 0.7
NEDD1-208ENST00000555806 CHURC1-FNTBB4DL54 471 aa19.42■□□□□ 0.7
NEDD1-208ENST00000555806 K7ESF4 209 aa19.42■□□□□ 0.7
NEDD1-208ENST00000555806 ATG13O75143 517 aa19.42■□□□□ 0.7
NEDD1-208ENST00000555806 PAPSS2O95340 614 aaPredicted RBP19.42■□□□□ 0.7
NEDD1-208ENST00000555806 IRF1P10914 325 aa19.42■□□□□ 0.7
NEDD1-208ENST00000555806 FNTBP49356 437 aa19.42■□□□□ 0.7
NEDD1-208ENST00000555806 PGFP49763 221 aa19.42■□□□□ 0.7
NEDD1-208ENST00000555806 DHCR24Q15392 516 aa19.42■□□□□ 0.7
NEDD1-208ENST00000555806 FBXO43Q4G163 708 aa19.42■□□□□ 0.7
NEDD1-208ENST00000555806 ZFRQ96KR1 1074 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms