RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PP2D1A8MPX8 630 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 CYP17A1P05093 508 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 FTH1P19P0C7X4 201 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 PLS3P13797 630 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 DPP6P42658 865 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 NCKAP1LP55160 1127 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 SEC13P55735 322 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 HNRNPDQ14103 355 aaKnown RBP9.79□□□□□ -0.84
PRKCH-218ENST00000555628 IL17AQ16552 155 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 ME3Q16798 604 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 HSF5Q4G112 596 aaPredicted RBP9.79□□□□□ -0.84
PRKCH-218ENST00000555628 SDHAF4Q5VUM1 108 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 WSCD1Q658N2 575 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 C12orf40Q86WS4 652 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 ALLCQ8N6M5 410 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 NECAB1Q8N987 351 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 CCDC26Q8TAB7 109 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 SH3RF2Q8TEC5 729 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 MRPS31Q92665 395 aaKnown RBP9.79□□□□□ -0.84
PRKCH-218ENST00000555628 EXOC4Q96A65 974 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 CRELD1Q96HD1 420 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 CCDC86Q9H6F5 360 aaKnown RBP9.79□□□□□ -0.84
PRKCH-218ENST00000555628 ABCB6Q9NP58 842 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 CPSF3Q9UKF6 684 aaKnown RBP9.79□□□□□ -0.84
PRKCH-218ENST00000555628 DSEQ9UL01 958 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 PCDHB11Q9Y5F2 797 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 SPTA1P02549 2419 aa9.79□□□□□ -0.84
PRKCH-218ENST00000555628 OGTO15294 1046 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 SH3BP5O60239 455 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 OPHN1O60890 802 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 OLFM2O95897 454 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 USP17L7P0C7H9 530 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 CSH1P0DML2 217 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 CSH2P0DML3 217 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 EIF2DP41214 584 aaKnown RBP9.78□□□□□ -0.84
PRKCH-218ENST00000555628 IFNAR2P48551 515 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 PSMD2Q13200 908 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 SLC14A1Q13336 389 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 PDIA5Q14554 519 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 TRIP6Q15654 476 aaKnown RBP9.78□□□□□ -0.84
PRKCH-218ENST00000555628 ZNF174Q15697 407 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 DUOXA1Q1HG43 343 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 HYIQ5T013 277 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 CENPQQ7L2Z9 268 aaPredicted RBP9.78□□□□□ -0.84
PRKCH-218ENST00000555628 SLCO6A1Q86UG4 719 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 SLC41A1Q8IVJ1 513 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 KIAA1958Q8N8K9 716 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 TXNDC5Q8NBS9 432 aaKnown RBP9.78□□□□□ -0.84
PRKCH-218ENST00000555628 CEP76Q8TAP6 659 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 CXorf38Q8TB03 319 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 BAHD1Q8TBE0 780 aaPredicted RBP9.78□□□□□ -0.84
PRKCH-218ENST00000555628 SPACA7Q96KW9 195 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 TIPINQ9BVW5 301 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 DERAQ9Y315 318 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 PCDHB5Q9Y5E4 795 aa9.78□□□□□ -0.84
PRKCH-218ENST00000555628 GOLGA4Q13439 2230 aaKnown RBP9.78□□□□□ -0.84
PRKCH-218ENST00000555628 PTPN13Q12923 2485 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 KNL1Q8NG31 2342 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 TRAV19A0A0A6YYK7 116 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 CYB561D2O14569 222 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 XPOTO43592 962 aaKnown RBP9.77□□□□□ -0.85
PRKCH-218ENST00000555628 KLF8O95600 359 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-218ENST00000555628 NFATC1O95644 943 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 CFIP05156 583 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 SLC6A11P48066 632 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 SLC12A3P55017 1021 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 GFPT1Q06210 699 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-218ENST00000555628 STRN3Q13033 797 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 KYAT1Q16773 422 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 DDR2Q16832 855 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 ARSHQ5FYA8 562 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 EMC10Q5UCC4 262 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 SCARA3Q6AZY7 606 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 ETFBKMTQ8IXQ9 262 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 HDDC3Q8N4P3 179 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 ARL14EPQ8N8R7 260 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-218ENST00000555628 PNPLA1Q8N8W4 532 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 SNX29Q8TEQ0 813 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 HNRNPLLQ8WVV9 542 aaKnown RBP9.77□□□□□ -0.85
PRKCH-218ENST00000555628 LRIG1Q96JA1 1093 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 FIZ1Q96SL8 496 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 PI4K2AQ9BTU6 479 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 GTPBP2Q9BX10 602 aaKnown RBP9.77□□□□□ -0.85
PRKCH-218ENST00000555628 ZDHHC4Q9NPG8 344 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 LRWD1Q9UFC0 647 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 C2CD2Q9Y426 696 aa9.77□□□□□ -0.85
PRKCH-218ENST00000555628 MUC22E2RYF6 1773 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-218ENST00000555628 CABIN1Q9Y6J0 2220 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 IGHV1OR15-9A0A0B4J2B8 117 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 A0A1W2PQF6 199 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 ALDH1A2O94788 518 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 KAT7O95251 611 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 PRB1P04280 392 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 CKMP06732 381 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 GABRG2P18507 467 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 CYP2F1P24903 491 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 TOB1P50616 345 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-218ENST00000555628 TMEM132DQ14C87 1099 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 CFAP221Q4G0U5 840 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 TTC38Q5R3I4 469 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms