RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 COPAP53621 1224 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 LILRA4P59901 499 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 MRPS35P82673 323 aaKnown RBP6.3□□□□□ -1.4
VRK1-205ENST00000555402 RAB30Q15771 203 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 CACHD1Q5VU97 1274 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 B3GNTL1Q67FW5 361 aaPredicted RBP6.3□□□□□ -1.4
VRK1-205ENST00000555402 ZNF425Q6IV72 752 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 LDHAL6AQ6ZMR3 332 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 GAS2L3Q86XJ1 694 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 GLIS1Q8NBF1 620 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 IPO4Q8TEX9 1081 aaKnown RBP6.3□□□□□ -1.4
VRK1-205ENST00000555402 RMDN3Q96TC7 470 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 DACT1Q9NYF0 836 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 RGL1Q9NZL6 768 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 HSFX1Q9UBD0 423 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 NOX1Q9Y5S8 564 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 DGKBQ9Y6T7 804 aa6.3□□□□□ -1.4
VRK1-205ENST00000555402 WDR91A4D1P6 747 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 DCLK1O15075 740 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 CCP110O43303 1012 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 RGS10O43665 173 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 TLR5O60602 858 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 ITGALP20701 1170 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 FGFR4P22455 802 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 TOB1P50616 345 aaPredicted RBP6.29□□□□□ -1.4
VRK1-205ENST00000555402 OCA2Q04671 838 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 SPARCL1Q14515 664 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 PREPLQ4J6C6 727 aaPredicted RBP6.29□□□□□ -1.4
VRK1-205ENST00000555402 PLAG1Q6DJT9 500 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 ZNF788Q6ZQV5 615 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 KRT28Q7Z3Y7 464 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 ZNF280BQ86YH2 543 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 PAF1Q8N7H5 531 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 CYP2W1Q8TAV3 490 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 LRIG1Q96JA1 1093 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 MED15Q96RN5 788 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 SMOC2Q9H3U7 446 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 AS3MTQ9HBK9 375 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 CASS4Q9NQ75 786 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 XPNPEP3Q9NQH7 507 aa6.29□□□□□ -1.4
VRK1-205ENST00000555402 ARPP21Q9UBL0 812 aaPredicted RBP6.29□□□□□ -1.4
VRK1-205ENST00000555402 ZNF70Q9UC06 446 aaPredicted RBP6.29□□□□□ -1.4
VRK1-205ENST00000555402 AQP12BA6NM10 295 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 PIP5K1BO14986 540 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 NPC1O15118 1278 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 SH3BP5O60239 455 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 SOAT2O75908 522 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 PIAS2O75928 621 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 KCNA2P16389 499 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 GABRB3P28472 473 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 LRPAP1P30533 357 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 ZNF134P52741 427 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 PRKAG1P54619 331 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 LOXL3P58215 753 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
VRK1-205ENST00000555402 GALNT1Q10472 559 aaPredicted RBP6.28□□□□□ -1.4
VRK1-205ENST00000555402 PRKG1Q13976 671 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 CRTC1Q6UUV9 634 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 TMEM108Q6UXF1 575 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 USP49Q70CQ1 688 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 KCTD20Q7Z5Y7 419 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 CLNKQ7Z7G1 428 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 POC1BQ8TC44 478 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 BPIFB1Q8TDL5 484 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 PPP2R3CQ969Q6 453 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 DHX36Q9H2U1 1008 aaKnown RBP6.28□□□□□ -1.4
VRK1-205ENST00000555402 NECTIN3Q9NQS3 549 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 TBCCD1Q9NVR7 557 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 VSX1Q9NZR4 365 aaPredicted RBP6.28□□□□□ -1.4
VRK1-205ENST00000555402 GRHPRQ9UBQ7 328 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 NEU2Q9Y3R4 380 aa6.28□□□□□ -1.4
VRK1-205ENST00000555402 A0A087WZ62 844 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 CCDC78A2IDD5 438 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 AQP7P3A6NL99 342 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 hCG_1984214I3L0E3 225 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 COQ9O75208 318 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 SUN1O94901 812 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 ATICP31939 592 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 PROK1P58294 105 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 MC2RQ01718 297 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 FPGSQ05932 587 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 KCNAB1Q14722 419 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 NPY5RQ15761 445 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 ARHGAP15Q53QZ3 475 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 FCRL6Q6DN72 434 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 USP17L6PQ6QN14 398 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 CACNA2D3Q8IZS8 1091 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 SPARTQ8N0X7 666 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 ACTRT2Q8TDY3 377 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 TRAPPC12Q8WVT3 735 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 TBC1D20Q96BZ9 403 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 NAP1L4Q99733 375 aaKnown RBP6.27□□□□□ -1.41
VRK1-205ENST00000555402 GDF15Q99988 308 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 ISCA1Q9BUE6 129 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 SORBS1Q9BX66 1292 aaKnown RBP6.27□□□□□ -1.41
VRK1-205ENST00000555402 PCDHAC1Q9H158 963 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 MAGEH1Q9H213 219 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 TMEM74BQ9NUR3 256 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 ASB6Q9NWX5 421 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 CTTNBP2NLQ9P2B4 639 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms