RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 IL18RAPO95256 599 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 ITGB3P05106 788 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 GABRG2P18507 467 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 ANXA13P27216 316 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 PCSK1P29120 753 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 GRIK1P39086 918 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 WASP42768 502 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 CFAP221Q4G0U5 840 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 BTBD8Q5XKL5 378 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 RHBDF2Q6PJF5 856 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 C4orf50Q6ZRC1 276 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 NT5DC4Q86YG4 428 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 ADGRF2Q8IZF7 708 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 TMEM86AQ8N2M4 240 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 ZNF513Q8N8E2 541 aaPredicted RBP14.12□□□□□ -0.15
TUBB3-207ENST00000554927 GLIS3Q8NEA6 775 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 CACTINQ8WUQ7 758 aaKnown RBP14.12□□□□□ -0.15
TUBB3-207ENST00000554927 FUBP3Q96I24 572 aaKnown RBP eCLIP14.12□□□□□ -0.15
TUBB3-207ENST00000554927 PANK4Q9NVE7 773 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 TBC1D7Q9P0N9 293 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 MAGEC2Q9UBF1 373 aaPredicted RBP14.12□□□□□ -0.15
TUBB3-207ENST00000554927 CYP8B1Q9UNU6 501 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 R3HCC1Q9Y3T6 440 aaKnown RBP14.12□□□□□ -0.15
TUBB3-207ENST00000554927 SNX9Q9Y5X1 595 aa14.12□□□□□ -0.15
TUBB3-207ENST00000554927 ADAMTS9Q9P2N4 1935 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 TNRC6BQ9UPQ9 1833 aaKnown RBP14.11□□□□□ -0.15
TUBB3-207ENST00000554927 PI4KAP42356 2102 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 IGHV1OR15-9A0A0B4J2B8 117 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 A0A1W2PQD8 194 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 HCRTO43612 131 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 NDUFS2O75306 463 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 KRT19P08727 400 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 HOXB2P14652 356 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 GNSP15586 552 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 PFKLP17858 780 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 NASPP49321 788 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-207ENST00000554927 SYCP2LQ5T4T6 812 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 L1TD1Q5T7N2 865 aaKnown RBP14.11□□□□□ -0.15
TUBB3-207ENST00000554927 TOGARAM2Q6ZUX3 1019 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 OSTM1Q86WC4 334 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 SLC41A1Q8IVJ1 513 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 PDILTQ8N807 584 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 NAT16Q8N8M0 369 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 SETD7Q8WTS6 366 aaKnown RBP14.11□□□□□ -0.15
TUBB3-207ENST00000554927 SNX21Q969T3 373 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 SMG1Q96Q15 3661 aaKnown RBP14.11□□□□□ -0.15
TUBB3-207ENST00000554927 PKMYT1Q99640 499 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 FAM124BQ9H5Z6 455 aaPredicted RBP14.11□□□□□ -0.15
TUBB3-207ENST00000554927 SCUBE2Q9NQ36 999 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 OLFML3Q9NRN5 406 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 TFIP11Q9UBB9 837 aaKnown RBP14.11□□□□□ -0.15
TUBB3-207ENST00000554927 SUSD2Q9UGT4 822 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 ASH1LQ9NR48 2969 aaKnown RBP14.11□□□□□ -0.15
TUBB3-207ENST00000554927 TCHHQ07283 1943 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 MYH11P35749 1972 aa14.11□□□□□ -0.15
TUBB3-207ENST00000554927 APC2O95996 2303 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 PTPRDP23468 1912 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 PPP6R2O75170 966 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 ZNF217O75362 1048 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 MBL2P11226 248 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-207ENST00000554927 CHRM1P11229 460 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-207ENST00000554927 BDNFP23560 247 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 MAGEA11P43364 429 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 LHX1P48742 406 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 USP46P62068 366 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 PSMC1P62191 440 aaKnown RBP14.1□□□□□ -0.15
TUBB3-207ENST00000554927 SLC7A9P82251 487 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 CYP27A1Q02318 531 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 C19orf57Q0VDD7 668 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 PREPLQ4J6C6 727 aaPredicted RBP14.1□□□□□ -0.15
TUBB3-207ENST00000554927 LY6G5CQ5SRR4 150 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 C10orf76Q5T2E6 689 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 DENND5BQ6ZUT9 1274 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 NUDT18Q6ZVK8 323 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 SLCO6A1Q86UG4 719 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 DDX42Q86XP3 938 aaKnown RBP eCLIP14.1□□□□□ -0.15
TUBB3-207ENST00000554927 CSGALNACT2Q8N6G5 542 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 LINC00301Q8NCQ3 95 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 ADAM32Q8TC27 787 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 NOC3LQ8WTT2 800 aaKnown RBP14.1□□□□□ -0.15
TUBB3-207ENST00000554927 MYLPFQ96A32 169 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 DNAJC19Q96DA6 116 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 SPATA17Q96L03 361 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 FAM213AQ9BRX8 229 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 RNF38Q9H0F5 515 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 CUEDC2Q9H467 287 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 EHD2Q9NZN4 543 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 ACACAQ13085 2346 aa14.1□□□□□ -0.15
TUBB3-207ENST00000554927 LOC400499M0QZD8 3231 aa14.09□□□□□ -0.15
TUBB3-207ENST00000554927 A0A0A0MRY4 1105 aa14.09□□□□□ -0.15
TUBB3-207ENST00000554927 ZNF840PA6NDX5 716 aa14.09□□□□□ -0.15
TUBB3-207ENST00000554927 GOLGA8CPA6NN73 597 aa14.09□□□□□ -0.15
TUBB3-207ENST00000554927 KIAA0391O15091 583 aaKnown RBP14.09□□□□□ -0.15
TUBB3-207ENST00000554927 CUTAO60888 179 aa14.09□□□□□ -0.15
TUBB3-207ENST00000554927 ATP2C2O75185 946 aa14.09□□□□□ -0.15
TUBB3-207ENST00000554927 GJB3O75712 270 aa14.09□□□□□ -0.15
TUBB3-207ENST00000554927 YEATS4O95619 227 aa14.09□□□□□ -0.15
TUBB3-207ENST00000554927 GARTP22102 1010 aa14.09□□□□□ -0.15
TUBB3-207ENST00000554927 GAD2Q05329 585 aa14.09□□□□□ -0.15
TUBB3-207ENST00000554927 IFRD2Q12894 506 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms