RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CDC25CP30307 473 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 CYLC1P35663 651 aaPredicted RBP17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 SCNN1AP37088 669 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 MTHFRP42898 656 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 PSEN1P49768 467 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 C1QBPQ07021 282 aaKnown RBP17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 ADIGQ0VDE8 80 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 SKIV2LQ15477 1246 aaKnown RBP17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 PTPN20Q4JDL3 420 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 ATAT1Q5SQI0 421 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 ALKBH5Q6P6C2 394 aaKnown RBP17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 MON1AQ86VX9 555 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 TMC8Q8IU68 726 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 ARHGAP18Q8N392 663 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 MAFAQ8NHW3 353 aaPredicted RBP17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 SCAMP5Q8TAC9 235 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 C18orf8Q96DM3 657 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 NECTIN4Q96NY8 510 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 CORO1BQ9BR76 489 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 ISCUQ9H1K1 167 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 WDR35Q9P2L0 1181 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 DNMT3BQ9UBC3 853 aaKnown RBP17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 CD207Q9UJ71 328 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 ZMYM5Q9UJ78 669 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 NAGPAQ9UK23 515 aa17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 MAGED2Q9UNF1 606 aaPredicted RBP17.3■□□□□ 0.36
SPTLC2-203ENST00000554901 SOBPA7XYQ1 873 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 E5RJQ4 531 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 NRDCO43847 1150 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 CALB1P05937 261 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 RHOP08100 348 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 GSCP56915 257 aaPredicted RBP17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 USP46P62068 366 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 MTMR3Q13615 1198 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 FBXO32Q969P5 355 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 TRIM11Q96F44 468 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 GCNAQ96QF7 691 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 TRIM62Q9BVG3 475 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 ULBP1Q9BZM6 244 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 BRWD1Q9NSI6 2320 aa17.29■□□□□ 0.36
SPTLC2-203ENST00000554901 GABBR2O75899 941 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 GLI1P08151 1106 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 ZDHHC11BP0C7U3 371 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 LCP1P13796 627 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 DAOAP59103 153 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 MRPS5P82675 430 aaKnown RBP17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 TAF10Q12962 218 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 ZNF268Q14587 947 aaPredicted RBP17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 C10orf76Q5T2E6 689 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 SNX30Q5VWJ9 437 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 TOGARAM2Q6ZUX3 1019 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 PDZD4Q76G19 769 aaPredicted RBP17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 MON1BQ7L1V2 547 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 GRASPQ7Z6J2 395 aaPredicted RBP17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 TMEM139Q8IV31 216 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 LRRC8AQ8IWT6 810 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 PPP1R9BQ96SB3 815 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 IL21Q9HBE4 155 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 WDR6Q9NNW5 1121 aaKnown RBP17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 TLR8Q9NR97 1041 aaKnown RBP17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 ASNSD1Q9NWL6 643 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 TRPM5Q9NZQ8 1165 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 ADAM22Q9P0K1 906 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 NENFQ9UMX5 172 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 CLUHO75153 1309 aa17.28■□□□□ 0.36
SPTLC2-203ENST00000554901 PAPSS1O43252 624 aaPredicted RBP17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 LCA5LO95447 670 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 FTLP02792 175 aaPredicted RBP17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 F11P03951 625 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 USP17L7P0C7H9 530 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 MYBL1P10243 752 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 PFKLP17858 780 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 PTP4A2Q12974 167 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 BEND5Q7L4P6 421 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 SCUBE3Q8IX30 993 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 MCOLN2Q8IZK6 566 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 ZNF276Q8N554 614 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 STKLD1Q8NE28 680 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 PPM1EQ8WY54 764 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 ZNF334Q9HCZ1 680 aaPredicted RBP17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 HCFC1R1Q9NWW0 138 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 TAS2R14Q9NYV8 317 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 GREB1Q4ZG55 1949 aa17.27■□□□□ 0.36
SPTLC2-203ENST00000554901 EIF3CLB5ME19 914 aaKnown RBP17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 IPO7O95373 1038 aaKnown RBP17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 ERBB2P04626 1255 aa17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 KCNA5P22460 613 aa17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 DDX6P26196 483 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 GABRR2P28476 465 aa17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 TUBP50607 506 aa17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 GFPT1Q06210 699 aaPredicted RBP17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 IFRD2Q12894 506 aaPredicted RBP17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 SMAD4Q13485 552 aaKnown RBP17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 PUS10Q3MIT2 529 aaKnown RBP17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 EFHC1Q5JVL4 640 aa17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 PRSS36Q5K4E3 855 aa17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 CCDC122Q5T0U0 273 aa17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 MMS22LQ6ZRQ5 1243 aa17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 GAREM2Q75VX8 874 aa17.26■□□□□ 0.35
SPTLC2-203ENST00000554901 XYLT1Q86Y38 959 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms