RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 CETN3O15182 167 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 ATG13O75143 517 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 ASS1P00966 412 aaKnown RBP13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 CCDC192P0DO97 292 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 EPB41P11171 864 aaKnown RBP13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 DRD1P21728 446 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 ASPAP45381 313 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 SLC6A11P48066 632 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 RSPO4Q2I0M5 234 aaPredicted RBP13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 C2orf27AQ580R0 203 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 DCAF17Q5H9S7 520 aaPredicted RBP13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 HECTD3Q5T447 861 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 FOXR2Q6PJQ5 311 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 LONP2Q86WA8 852 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 SMARCE1Q969G3 411 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 CYFIP2Q96F07 1278 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 CEP295NLQ96MC4 621 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 HEXIM2Q96MH2 286 aaKnown RBP13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 HHIPQ96QV1 700 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 MED15Q96RN5 788 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 TWNKQ96RR1 684 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 TSG101Q99816 390 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 RMND1Q9NWS8 449 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 INVSQ9Y283 1065 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 SH3BP1Q9Y3L3 701 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 ATG2BQ96BY7 2078 aa13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 KIF26AQ9ULI4 1882 aaPredicted RBP13.04□□□□□ -0.32
CCDC85C-202ENST00000554877 ANTXRLA6NF34 631 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 COCHO43405 550 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 SMC2O95347 1197 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 TBX18O95935 607 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 FAM200BP0CF97 657 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 SLC7A9P82251 487 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 ENPEPQ07075 957 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 DHCR24Q15392 516 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 UNC93AQ86WB7 457 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 ADGRG2Q8IZP9 1017 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 CRYBG2Q8N1P7 616 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 CCDC33Q8N5R6 958 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 NAT16Q8N8M0 369 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 PDZD8Q8NEN9 1154 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 ZMIZ2Q8NF64 920 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 SEMA4DQ92854 862 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 DUSP9Q99956 384 aaKnown RBP13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 NT5C1AQ9BXI3 368 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 TMEM8AQ9HCN3 771 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 NUDT5Q9UKK9 219 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 OBSL1O75147 1896 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 GREB1Q4ZG55 1949 aa13.03□□□□□ -0.32
CCDC85C-202ENST00000554877 USP34Q70CQ2 3546 aa13.02□□□□□ -0.32
CCDC85C-202ENST00000554877 COL4A2P08572 1712 aa13.02□□□□□ -0.32
CCDC85C-202ENST00000554877 PATJQ8NI35 1801 aa13.02□□□□□ -0.32
CCDC85C-202ENST00000554877 DENND4CQ5VZ89 1909 aa13.02□□□□□ -0.32
CCDC85C-202ENST00000554877 SLC9A3R1O14745 358 aaPredicted RBP13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 TNFRSF10BO14763 440 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 OAS1P00973 400 aaKnown RBP13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 CYP17A1P05093 508 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 ACO1P21399 889 aaKnown RBP13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 PGFP49763 221 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 KDSRQ06136 332 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 LRMPQ12912 555 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 CCDC6Q16204 474 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 ANO4Q32M45 955 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 KRT39Q6A163 491 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 ANKRD40Q6AI12 368 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 LAIR1Q6GTX8 287 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 TTI2Q6NXR4 508 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 GPT2Q8TD30 523 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 TATDN2Q93075 761 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 NIF3L1Q9GZT8 377 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 CLSTN2Q9H4D0 955 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 CYP3A43Q9HB55 503 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 KIAA1468Q9P260 1216 aa13.02□□□□□ -0.33
CCDC85C-202ENST00000554877 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 TRIM49BA6NDI0 452 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 STX10O60499 249 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 PFKLP17858 780 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 TIE1P35590 1138 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 OPRD1P41143 372 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 MXI1P50539 228 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 DGKEP52429 567 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 DMC1Q14565 340 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 FBXO43Q4G163 708 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 LY6G5CQ5SRR4 150 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 EMC10Q5UCC4 262 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 KLHL10Q6JEL2 608 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 RHBDF2Q6PJF5 856 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 RBM43Q6ZSC3 357 aaKnown RBP13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 GPRIN1Q7Z2K8 1008 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 DGLUCYQ7Z3D6 616 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 WDR5BQ86VZ2 330 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 DDX42Q86XP3 938 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 EZH1Q92800 747 aaPredicted RBP13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 WBP2Q969T9 261 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 ERLEC1Q96DZ1 483 aa13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 HNRNPABQ99729 332 aaKnown RBP13.01□□□□□ -0.33
CCDC85C-202ENST00000554877 GTPBP4Q9BZE4 634 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms