RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 CALRP27797 417 aaKnown RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 CASP1P29466 404 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 MNAT1P51948 309 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 NAPAP54920 295 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 ACTN3Q08043 901 aaPredicted RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 MESP2Q0VG99 397 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 NEDD9Q14511 834 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 PTGISQ16647 500 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 PRSS53Q2L4Q9 553 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 ASPRV1Q53RT3 343 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 TMEM31Q5JXX7 168 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 KIAA1755Q5JYT7 1200 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 HYIQ5T013 277 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 C12orf60Q5U649 245 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 KLHDC7AQ5VTJ3 777 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 NAA35Q5VZE5 725 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 HLA-DQA1Q5Y7H0 255 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 DENND5AQ6IQ26 1287 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 POMZP3Q6PJE2 187 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 CCDC121Q6ZUS5 278 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 SPATC1Q76KD6 591 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 RRAGAQ7L523 313 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 CCDC65Q8IXS2 484 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 FAM126BQ8IXS8 530 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 ZC3H3Q8IXZ2 948 aaKnown RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 ZNF444Q8N0Y2 327 aaPredicted RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 SPICE1Q8N0Z3 855 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 KREMEN2Q8NCW0 462 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 CCHCR1Q8TD31 782 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 FRS2Q8WU20 508 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 SREK1Q8WXA9 508 aaKnown RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 ATRIPQ8WXE1 791 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 STAMQ92783 540 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 CCDC17Q96LX7 622 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 ZIM3Q96PE6 472 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 DIRC2Q96SL1 478 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 LRFN3Q9BTN0 628 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 TLR10Q9BXR5 811 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 RAB17Q9H0T7 212 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 UPF3AQ9H1J1 476 aaKnown RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 ABHD16BQ9H3Z7 469 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 MMRN2Q9H8L6 949 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 METTL14Q9HCE5 456 aaKnown RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 INCENPQ9NQS7 918 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 TRIM10Q9UDY6 481 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 TMEFF2Q9UIK5 374 aaPredicted RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 TTC7AQ9ULT0 858 aaPredicted RBP6.33□□□□□ -1.4
VPS33B-203ENST00000554264 MYH4Q9Y623 1939 aa6.33□□□□□ -1.4
VPS33B-203ENST00000554264 GTPBP10A4D1E9 387 aaKnown RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 C5orf60A6NFR6 353 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 LRRC53A6NM62 1247 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 VGLL3A8MV65 326 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 PGRMC1O00264 195 aaKnown RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 SLC16A3O15427 465 aaKnown RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 CCNT1O60563 726 aaKnown RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 SRGAP2O75044 1071 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 CABYRO75952 493 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 MOCS3O95396 460 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 SNAI1O95863 264 aaPredicted RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 CD4P01730 458 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 PRKCAP17252 672 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 POU3F3P20264 500 aaPredicted RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 RPL13P26373 211 aaKnown RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 HNRNPH1P31943 449 aaKnown RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 CYP2C18P33260 490 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 PRKCIP41743 596 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 NOVP48745 357 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 SEPHS1P49903 392 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 KCNQ1P51787 676 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 GJA9P57773 515 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 PPP2R2AP63151 447 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 TFAP4Q01664 338 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 STK4Q13043 487 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 ITGB3BPQ13352 177 aaPredicted RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 ACVR2BQ13705 512 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 RPS6KA1Q15418 735 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 ASIC2Q16515 512 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 CALCRLQ16602 461 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 INF2Q27J81 1249 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 CCDC40Q4G0X9 1142 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 TMEM119Q4V9L6 283 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 LACTB2Q53H82 288 aaPredicted RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 TDRD12Q587J7 1177 aaKnown RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 GKAP1Q5VSY0 366 aaPredicted RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 GALNT18Q6P9A2 607 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 MOXD1Q6UVY6 613 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 MPZL3Q6UWV2 235 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 LRRC55Q6ZSA7 311 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 HEATR3Q7Z4Q2 680 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 FRMD5Q7Z6J6 570 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 NLRP14Q86W24 1093 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 SIAH1Q8IUQ4 282 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 RPUSD2Q8IZ73 545 aaKnown RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 GBP7Q8N8V2 638 aaPredicted RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 MYCBPAPQ8TBZ2 947 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 ZNF473Q8WTR7 871 aaKnown RBP6.32□□□□□ -1.4
VPS33B-203ENST00000554264 SEC14L1Q92503 715 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 RAD54LQ92698 747 aa6.32□□□□□ -1.4
VPS33B-203ENST00000554264 CCDC43Q96MW1 224 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms