RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CSNK1G1Q9HCP0 422 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 DMAP1Q9NPF5 467 aaPredicted RBP7.02□□□□□ -1.29
SLIRP-203ENST00000554074 SEMA4GQ9NTN9 838 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 TBC1D14Q9P2M4 693 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 NXF1Q9UBU9 619 aaKnown RBP7.02□□□□□ -1.29
SLIRP-203ENST00000554074 PCDHGA5Q9Y5G8 931 aa7.02□□□□□ -1.29
SLIRP-203ENST00000554074 ASCC3Q8N3C0 2202 aaKnown RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 A0A0A0MRY4 1105 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 A0A1B0GVL5 298 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 E2F8A0AVK6 867 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 MED19A0JLT2 244 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 SLC30A4O14863 429 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 AXIN1O15169 862 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 CALUO43852 315 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 EPN2O95208 641 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 APBB3O95704 486 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 CYP17A1P05093 508 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 MBL2P11226 248 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 TRIM21P19474 475 aaKnown RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 RPL13P26373 211 aaKnown RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 OPRD1P41143 372 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 SYKP43405 635 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 LIMK1P53667 647 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 CDH8P55286 799 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 DLG4P78352 724 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 MRPS21P82921 87 aaKnown RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 INCA1Q0VD86 236 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 DPYDQ12882 1025 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 SRSF5Q13243 272 aaKnown RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 DHCR24Q15392 516 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 LPAL2Q16609 132 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 HSF5Q4G112 596 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 HECTD3Q5T447 861 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 INTS8Q75QN2 995 aaKnown RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 SV2AQ7L0J3 742 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 C11orf74Q86VG3 221 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 RASSF3Q86WH2 238 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 ADGRG2Q8IZP9 1017 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 FUKQ8N0W3 1084 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 GUF1Q8N442 669 aaKnown RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 SPDYE1Q8NFV5 336 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 RPLP0P6Q8NHW5 317 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 DDX1Q92499 740 aaKnown RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 FBXO32Q969P5 355 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 IPO9Q96P70 1041 aaKnown RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 KCNK16Q96T55 309 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 SDCBP2Q9H190 292 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 FBXO44Q9H4M3 255 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 FAM124BQ9H5Z6 455 aaPredicted RBP7.01□□□□□ -1.29
SLIRP-203ENST00000554074 CYP3A43Q9HB55 503 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 PNPLA8Q9NP80 782 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 FRMD4BQ9Y2L6 1034 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 ZDHHC9Q9Y397 364 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 CPQQ9Y646 472 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 CACNA1EQ15878 2313 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 CKAP5Q14008 2032 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 ACACBO00763 2458 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 CACNA1GO43497 2377 aa7.01□□□□□ -1.29
SLIRP-203ENST00000554074 CACNA1BQ00975 2339 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7□□□□□ -1.29
SLIRP-203ENST00000554074 K7EQS6 105 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 CLDN5O00501 218 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 COCHO43405 550 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 KRT37O76014 449 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 ADH1CP00326 375 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 ABL1P00519 1130 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 HLA-DRAP01903 254 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 ZNF806P0C7X5 589 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 CCDC192P0DO97 292 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 CHRM1P11229 460 aaPredicted RBP7□□□□□ -1.29
SLIRP-203ENST00000554074 NR2F2P24468 414 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 GTF2H1P32780 548 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 ASPAP45381 313 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 VAMP7P51809 220 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 NDUFA8P51970 172 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 SLC5A3P53794 718 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 DMC1Q14565 340 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 EDRF1Q3B7T1 1238 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 PREPLQ4J6C6 727 aaPredicted RBP7□□□□□ -1.29
SLIRP-203ENST00000554074 PLA2G2CQ5R387 149 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 C1orf220Q5T0J3 134 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 CEP135Q66GS9 1140 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 NAIF1Q69YI7 327 aaPredicted RBP7□□□□□ -1.29
SLIRP-203ENST00000554074 SCARA5Q6ZMJ2 495 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 KRBA2Q6ZNG9 492 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 FILIP1Q7Z7B0 1213 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 ACOT1Q86TX2 421 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 TTC39CQ8N584 583 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 ZMIZ2Q8NF64 920 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 KCNV2Q8TDN2 545 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 USP33Q8TEY7 942 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 CCDC34Q96HJ3 373 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 ZFRQ96KR1 1074 aaKnown RBP7□□□□□ -1.29
SLIRP-203ENST00000554074 CNOT6LQ96LI5 555 aaKnown RBP7□□□□□ -1.29
SLIRP-203ENST00000554074 HHIPQ96QV1 700 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 HNRNPABQ99729 332 aaKnown RBP7□□□□□ -1.29
SLIRP-203ENST00000554074 SMOQ99835 787 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 MED10Q9BTT4 135 aa7□□□□□ -1.29
SLIRP-203ENST00000554074 IMPG2Q9BZV3 1241 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms