RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 MAOBP27338 520 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 OXTRP30559 389 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 EIF2DP41214 584 aaKnown RBP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 PDE6CP51160 858 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 PCBP4P57723 403 aaKnown RBP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 ANTXR2P58335 489 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 CYP4F8P98187 520 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 AKAP17AQ02040 695 aaKnown RBP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 ILKQ13418 452 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 HIF1AQ16665 826 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 PFKFB3Q16875 520 aaPredicted RBP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 GLRA4Q5JXX5 417 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 RNF187Q5TA31 235 aaPredicted RBP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 TXNDC8Q6A555 127 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 B3GNT9Q6UX72 402 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 TPH2Q8IWU9 490 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 DHX40Q8IX18 779 aaKnown RBP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 EFCAB13Q8IY85 973 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 ADGRG2Q8IZP9 1017 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 KIAA1958Q8N8K9 716 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 ATAD1Q8NBU5 361 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 C3orf58Q8NDZ4 430 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 TTC16Q8NEE8 873 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 SNX29Q8TEQ0 813 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 C2orf15Q8WU43 125 aaKnown RBP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 PSMG3-AS1Q96PY0 264 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 MTMR9Q96QG7 549 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 RSRP1Q9BUV0 290 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 PHACTR1Q9C0D0 580 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 MIR1-1HGQ9H1L0 117 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 LINC00597Q9H2U6 94 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 CPNE5Q9HCH3 593 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 ANKEF1Q9NU02 776 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 SIRPGQ9P1W8 387 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 UXTQ9UBK9 157 aaPredicted RBP5.59□□□□□ -1.51
CKAP4-203ENST00000553039 STRIP2Q9ULQ0 834 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 CCL26Q9Y258 94 aa5.59□□□□□ -1.51
CKAP4-203ENST00000553039 TRAV19A0A0A6YYK7 116 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 SH2B2O14492 632 aaPredicted RBP5.58□□□□□ -1.52
CKAP4-203ENST00000553039 KLK10O43240 276 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 SIAH2O43255 324 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 BRINP1O60477 761 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 LDOC1O95751 146 aaPredicted RBP5.58□□□□□ -1.52
CKAP4-203ENST00000553039 ADH1CP00326 375 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 F11P03951 625 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 HNRNPLP14866 589 aaKnown RBP eCLIP5.58□□□□□ -1.52
CKAP4-203ENST00000553039 KCNE1P15382 129 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 GABRG2P18507 467 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 GLRA2P23416 452 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 CD6P30203 668 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 HSPA4P34932 840 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 OPRD1P41143 372 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 RPIAP49247 311 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 AFF3P51826 1226 aaKnown RBP5.58□□□□□ -1.52
CKAP4-203ENST00000553039 EFNA5P52803 228 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 NLRP12P59046 1061 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 NLRP5P59047 1200 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 E2F1Q01094 437 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 MYO1EQ12965 1108 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 PPP2R5CQ13362 524 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 CAPSQ13938 189 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 MGAT5BQ3V5L5 792 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 C8orf34Q49A92 452 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 XKR4Q5GH76 650 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 CCDC181Q5TID7 509 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 NAIF1Q69YI7 327 aaPredicted RBP5.58□□□□□ -1.52
CKAP4-203ENST00000553039 ALKAL1Q6UXT8 129 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 DSTYKQ6XUX3 929 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 MICU3Q86XE3 530 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 MB21D2Q8IYB1 491 aaPredicted RBP5.58□□□□□ -1.52
CKAP4-203ENST00000553039 FAM26EQ8N5C1 309 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 FSIP1Q8NA03 581 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 ASAP3Q8TDY4 903 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 KCNE4Q8WWG9 221 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 GJA10Q969M2 543 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 SKA1Q96BD8 255 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 NAF1Q96HR8 494 aaKnown RBP5.58□□□□□ -1.52
CKAP4-203ENST00000553039 ACAP3Q96P50 834 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 SEPT5Q99719 369 aaPredicted RBP5.58□□□□□ -1.52
CKAP4-203ENST00000553039 SEMA3CQ99985 751 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 TRIM4Q9C037 500 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 PDZD7Q9H5P4 517 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 TMEM206Q9H813 350 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 IL21RQ9HBE5 538 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 GOLGA2P5Q9HBQ8 144 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 ARHGEF4Q9NR80 690 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 RAB6BQ9NRW1 208 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 PGPEP1Q9NXJ5 209 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 CALCOCO1Q9P1Z2 691 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 CYP8B1Q9UNU6 501 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 ZNF232Q9UNY5 417 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 PRKAB1Q9Y478 270 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 PCDHB6Q9Y5E3 794 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 UBR5O95071 2799 aaPredicted RBP5.58□□□□□ -1.52
CKAP4-203ENST00000553039 WDR81Q562E7 1941 aa5.58□□□□□ -1.52
CKAP4-203ENST00000553039 C2CD3Q4AC94 2353 aa5.57□□□□□ -1.52
CKAP4-203ENST00000553039 E2F8A0AVK6 867 aa5.57□□□□□ -1.52
CKAP4-203ENST00000553039 MTMR11A4FU01 709 aa5.57□□□□□ -1.52
CKAP4-203ENST00000553039 METTL12A8MUP2 240 aa5.57□□□□□ -1.52
CKAP4-203ENST00000553039 TGFBR3LH3BV60 316 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms