RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 LHX1P48742 406 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 CUL2Q13617 745 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 CCINQ13939 588 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 STPG1Q5TH74 334 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 WSCD1Q658N2 575 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 PKN3Q6P5Z2 889 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 ENOSF1Q7L5Y1 443 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 GAS2L3Q86XJ1 694 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 ARID3BQ8IVW6 561 aaPredicted RBP12.08□□□□□ -0.48
TMEM116-218ENST00000552839 PDCL2Q8N4E4 241 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 SEMA4DQ92854 862 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 ELMO3Q96BJ8 720 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 LOXL4Q96JB6 756 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 ZFYVE19Q96K21 471 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 XPO4Q9C0E2 1151 aaKnown RBP12.08□□□□□ -0.48
TMEM116-218ENST00000552839 HSD3B7Q9H2F3 369 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 VRTNQ9H8Y1 702 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 CYP3A43Q9HB55 503 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 UBE2TQ9NPD8 197 aaPredicted RBP12.08□□□□□ -0.48
TMEM116-218ENST00000552839 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
TMEM116-218ENST00000552839 GDAP2Q9NXN4 497 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 APEX2Q9UBZ4 518 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 L1RE1Q9UN81 338 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 COQ4Q9Y3A0 265 aa12.08□□□□□ -0.48
TMEM116-218ENST00000552839 ZNF638Q14966 1978 aaKnown RBP12.08□□□□□ -0.48
TMEM116-218ENST00000552839 DENND4CQ5VZ89 1909 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 EPN2O95208 641 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 KCNK5O95279 499 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 PROS1P07225 676 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 SLC9A1P19634 815 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 PON1P27169 355 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 PXNP49023 591 aaPredicted RBP12.07□□□□□ -0.48
TMEM116-218ENST00000552839 AARSP49588 968 aaKnown RBP eCLIP12.07□□□□□ -0.48
TMEM116-218ENST00000552839 ARHGAP44Q17R89 818 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 PLA2G2CQ5R387 149 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 GAREM2Q75VX8 874 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 RRAGAQ7L523 313 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 DPH6Q7L8W6 267 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 KBTBD6Q86V97 674 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 DCP1BQ8IZD4 617 aaKnown RBP12.07□□□□□ -0.48
TMEM116-218ENST00000552839 SPATA18Q8TC71 538 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 GAB3Q8WWW8 586 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 TNIP3Q96KP6 325 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 OXCT2Q9BYC2 517 aaPredicted RBP12.07□□□□□ -0.48
TMEM116-218ENST00000552839 XYLT2Q9H1B5 865 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 CRISPLD1Q9H336 500 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 SMOC1Q9H4F8 434 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 APOBEC3GQ9HC16 384 aaKnown RBP12.07□□□□□ -0.48
TMEM116-218ENST00000552839 DDX43Q9NXZ2 648 aaKnown RBP12.07□□□□□ -0.48
TMEM116-218ENST00000552839 DAAM1Q9Y4D1 1078 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 PCDHB4Q9Y5E5 795 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 ATP8B3O60423 1300 aa12.07□□□□□ -0.48
TMEM116-218ENST00000552839 NUP205Q92621 2012 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 OR6C75A6NL08 312 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 RPP40O75818 363 aaKnown RBP12.06□□□□□ -0.48
TMEM116-218ENST00000552839 OR4Q2P0C623 313 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 CD19P15391 556 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 WARSP23381 471 aaKnown RBP12.06□□□□□ -0.48
TMEM116-218ENST00000552839 GNL1P36915 607 aaPredicted RBP12.06□□□□□ -0.48
TMEM116-218ENST00000552839 ASPAP45381 313 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 GCNT1Q02742 428 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 TNK2Q07912 1038 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 DUSP4Q13115 394 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 COL9A2Q14055 689 aaPredicted RBP12.06□□□□□ -0.48
TMEM116-218ENST00000552839 ARHGAP29Q52LW3 1261 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 SARM1Q6SZW1 724 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 FMNL3Q8IVF7 1028 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 ARHGEF19Q8IW93 802 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 SYNPOQ8N3V7 929 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 ZNF397Q8NF99 534 aaPredicted RBP12.06□□□□□ -0.48
TMEM116-218ENST00000552839 CXorf38Q8TB03 319 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 TATDN2Q93075 761 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 IQCDQ96DY2 449 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 FAXDC2Q96IV6 333 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 NAP1L5Q96NT1 182 aaPredicted RBP12.06□□□□□ -0.48
TMEM116-218ENST00000552839 PGLYRP2Q96PD5 576 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 ERGIC2Q96RQ1 377 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 SYT15Q9BQS2 421 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 MRPL45Q9BRJ2 306 aaKnown RBP12.06□□□□□ -0.48
TMEM116-218ENST00000552839 DNAJC12Q9UKB3 198 aa12.06□□□□□ -0.48
TMEM116-218ENST00000552839 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.06□□□□□ -0.48
TMEM116-218ENST00000552839 TSC2P49815 1807 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 CCDC163A0A0D9SF12 145 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 A0A1W2PQC6 194 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 LRRC10BA6NIK2 292 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 C1QTNF9BB2RNN3 333 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 DPYSL4O14531 572 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 TEX33O43247 280 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 TACC1O75410 805 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 OAZ2O95190 189 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 CYP11A1P05108 521 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 PDGFRBP09619 1106 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 C1QTNF9P0C862 333 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 ACAT1P24752 427 aaKnown RBP12.05□□□□□ -0.48
TMEM116-218ENST00000552839 EPHB3P54753 998 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 CDH8P55286 799 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 MCCD1P59942 119 aaPredicted RBP12.05□□□□□ -0.48
TMEM116-218ENST00000552839 POLR2FP61218 127 aaKnown RBP12.05□□□□□ -0.48
TMEM116-218ENST00000552839 TRIM14Q14142 442 aa12.05□□□□□ -0.48
TMEM116-218ENST00000552839 MAPRE1Q15691 268 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms