RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 CREMQ03060 361 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 SMARCB1Q12824 385 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 TAF12Q16514 161 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 PLEKHA7Q6IQ23 1121 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 VSTM1Q6UX27 236 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 NYAP1Q6ZVC0 841 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 RBM23Q86U06 439 aaKnown RBP9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 TPCN2Q8NHX9 752 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 JOSD2Q8TAC2 188 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 C2orf15Q8WU43 125 aaKnown RBP9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 KCTD13Q8WZ19 329 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 SAMD11Q96NU1 681 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 KLHL5Q96PQ7 755 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 WDR24Q96S15 920 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 FNIP2Q9P278 1114 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 AFF4Q9UHB7 1163 aaKnown RBP9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 SH3BP1Q9Y3L3 701 aa9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 ZNF638Q14966 1978 aaKnown RBP9.17□□□□□ -0.94
AC055716.2-201ENST00000552545 GRID2IPA4D2P6 1211 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 C2orf71A6NGG8 1288 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 SIGLEC16A6NMB1 481 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 HHLA1C9JL84 531 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 H3BNC9 293 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 RFXAPO00287 272 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 BUB1BO60566 1050 aaPredicted RBP9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 ADH1AP07327 375 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 ATF2P15336 505 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 RFC1P35251 1148 aaPredicted RBP9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 ALDH1A3P47895 512 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 SLC5A3P53794 718 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 RPL10AP62906 217 aaKnown RBP9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 MLLT1Q03111 559 aaPredicted RBP9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 MTMR3Q13615 1198 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 RAB33AQ14088 237 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 TPGS2Q68CL5 300 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 NUP93Q8N1F7 819 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 MRPL43Q8N983 215 aaKnown RBP9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 TRIM58Q8NG06 486 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 GDPD5Q8WTR4 605 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 MCRS1Q96EZ8 462 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 ABCB6Q9NP58 842 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 PACSIN2Q9UNF0 486 aaPredicted RBP9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 PLXNA3P51805 1871 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 PER2O15055 1255 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 TGM5O43548 720 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 NCK2O43639 380 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 LILRB3O75022 631 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 ABLIM3O94929 683 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 ZBED1O96006 694 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 ATXN8OSP0DMR3 200 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 MAGEA11P43364 429 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 TUFMP49411 452 aaKnown RBP9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 RGS19P49795 217 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 ETF1P62495 437 aaKnown RBP9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 MRPS5P82675 430 aaKnown RBP9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 UBE3AQ05086 875 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 CDO1Q16878 200 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 DAB2IPQ5VWQ8 1189 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 OLFML1Q6UWY5 402 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 PEX26Q7Z412 305 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 GOLGA1Q92805 767 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 TIFAQ96CG3 184 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 C8orf48Q96LL4 319 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 UBXN6Q9BZV1 441 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 RXFP1Q9HBX9 757 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 NGRNQ9NPE2 291 aaKnown RBP9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 CYLDQ9NQC7 956 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 PATJQ8NI35 1801 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 CHD7Q9P2D1 2997 aa9.16□□□□□ -0.94
AC055716.2-201ENST00000552545 TMEM191CA6NGB0 347 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 CAPN9O14815 690 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 SPOPO43791 374 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 FBXO21O94952 628 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 PDGFRAP16234 1089 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 PSMA2P25787 234 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 GJC1P36383 396 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 CAMK1Q14012 370 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 RAB41Q5JT25 222 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 EFHC1Q5JVL4 640 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 DENND5BQ6ZUT9 1274 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 CPNE8Q86YQ8 564 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 ZDHHC17Q8IUH5 632 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 SYCE1Q8N0S2 351 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 EDEM1Q92611 657 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 CFAP57Q96MR6 1250 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 GREB1Q4ZG55 1949 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 CHD9Q3L8U1 2897 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 SYNJ2BP-COX16A0A087WUM0 186 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 TCRBV5S1A1TA0A578 114 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 YJEFN3A6XGL0 299 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 E7ENQ6 273 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 KIF2AO00139 706 aaPredicted RBP9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 GLUD1P00367 558 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 ATF6P18850 670 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 FLT3P36888 993 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 RPL34P49207 117 aaKnown RBP9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 DAOAP59103 153 aa9.15□□□□□ -0.94
AC055716.2-201ENST00000552545 USP46P62068 366 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 427.4 ms