RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SRFP11831 508 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 FCARP24071 287 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 COPB1P53618 953 aaKnown RBP18.3■□□□□ 0.52
CDK4-208ENST00000551706 BCAT1P54687 386 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 TAF10Q12962 218 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 STXBP5Q5T5C0 1151 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 TANGO2Q6ICL3 276 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 ARID3BQ8IVW6 561 aaPredicted RBP18.3■□□□□ 0.52
CDK4-208ENST00000551706 CMTM8Q8IZV2 173 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 KXD1Q9BQD3 176 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 SLC46A2Q9BY10 475 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 UBXN6Q9BZV1 441 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 HSD3B7Q9H2F3 369 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 SIX2Q9NPC8 291 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 TSPAN16Q9UKR8 245 aa18.3■□□□□ 0.52
CDK4-208ENST00000551706 FAM92AA1XBS5 289 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 LGALS16A8MUM7 142 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 RNF225M0QZC1 329 aaPredicted RBP18.29■□□□□ 0.52
CDK4-208ENST00000551706 O00370 1275 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 AVPR1AP37288 418 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 TPM4P67936 248 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 KCNMA1Q12791 1236 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 IFRD2Q12894 506 aaPredicted RBP18.29■□□□□ 0.52
CDK4-208ENST00000551706 ARHGAP44Q17R89 818 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 GOLGA7BQ2TAP0 167 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 GJB7Q6PEY0 223 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 MAB21L3Q8N8X9 362 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 DEPDC1BQ8WUY9 529 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 SHC3Q92529 594 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 FBXO32Q969P5 355 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 RPP25Q9BUL9 199 aaKnown RBP18.29■□□□□ 0.52
CDK4-208ENST00000551706 OBP2AQ9NY56 170 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 DNAJC12Q9UKB3 198 aa18.29■□□□□ 0.52
CDK4-208ENST00000551706 CHD6Q8TD26 2715 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 TRAV19A0A0A6YYK7 116 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 ZNF840PA6NDX5 716 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 HHLA1C9JL84 531 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 DPYSL4O14531 572 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 SETSIPP0DME0 302 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 BST2Q10589 180 aaKnown RBP18.28■□□□□ 0.52
CDK4-208ENST00000551706 CNGA2Q16280 664 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 KLHDC7AQ5VTJ3 777 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 TXNDC8Q6A555 127 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 LCLAT1Q6UWP7 414 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 TTC30AQ86WT1 665 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 SCAMP5Q8TAC9 235 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 LSM14BQ9BX40 385 aaKnown RBP18.28■□□□□ 0.52
CDK4-208ENST00000551706 KIF9Q9HAQ2 790 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 TRPC7Q9HCX4 862 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 PLCB1Q9NQ66 1216 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 SLC2A4RGQ9NR83 387 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 WNT16Q9UBV4 365 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 DAAM1Q9Y4D1 1078 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 SPTBN2O15020 2390 aa18.28■□□□□ 0.52
CDK4-208ENST00000551706 CFAP47Q6ZTR5 3102 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 HEPACAM2A8MVW5 462 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 XPO1O14980 1071 aaKnown RBP18.27■□□□□ 0.52
CDK4-208ENST00000551706 MED7O43513 233 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 USP17L7P0C7H9 530 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 PSMC3P17980 439 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 SDHBP21912 280 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 KIF11P52732 1056 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 PFKPQ01813 784 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 APBA1Q02410 837 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 ZNF268Q14587 947 aaPredicted RBP18.27■□□□□ 0.52
CDK4-208ENST00000551706 IQCB1Q15051 598 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 ST3GAL2Q16842 350 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 SNX30Q5VWJ9 437 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 PIGZQ86VD9 579 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 MFSD6LQ8IWD5 586 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 CELF5Q8N6W0 485 aaKnown RBP18.27■□□□□ 0.52
CDK4-208ENST00000551706 ST13P5Q8NFI4 369 aaPredicted RBP18.27■□□□□ 0.52
CDK4-208ENST00000551706 TFAP2BQ92481 460 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 TRMT61BQ9BVS5 477 aaKnown RBP18.27■□□□□ 0.52
CDK4-208ENST00000551706 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.27■□□□□ 0.52
CDK4-208ENST00000551706 SCML2Q9UQR0 700 aa18.27■□□□□ 0.52
CDK4-208ENST00000551706 NARSO43776 548 aaKnown RBP18.26■□□□□ 0.51
CDK4-208ENST00000551706 ABL1P00519 1130 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 CKMP06732 381 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 SP9P0CG40 484 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 ATP1A3P13637 1013 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 UCHL3P15374 230 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 HDCP19113 662 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 BRD2P25440 801 aaKnown RBP18.26■□□□□ 0.51
CDK4-208ENST00000551706 USP8P40818 1118 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 VIPR2P41587 438 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 TUBP50607 506 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 UBXN1Q04323 297 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 PDE4CQ08493 712 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 MEA1Q16626 185 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 FILIP1LQ4L180 1135 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 DPY19L2P1Q6NXN4 242 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 VITQ6UXI7 678 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 APTXQ7Z2E3 356 aaKnown RBP18.26■□□□□ 0.51
CDK4-208ENST00000551706 PLA2G2FQ9BZM2 168 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 CBX8Q9HC52 389 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 TLR8Q9NR97 1041 aaKnown RBP18.26■□□□□ 0.51
CDK4-208ENST00000551706 TDP1Q9NUW8 608 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 FANCMQ8IYD8 2048 aa18.26■□□□□ 0.51
CDK4-208ENST00000551706 MAP1BP46821 2468 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms