RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 YWHAZP63104 245 aaKnown RBP10.92□□□□□ -0.66
NEK3-203ENST00000551355 TUBB2AQ13885 445 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 VEPH1Q14D04 833 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 PTPROQ16827 1216 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 DENND5BQ6ZUT9 1274 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 DNAAF5Q86Y56 855 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 NIPA2Q8N8Q9 360 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 LRRC57Q8N9N7 239 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 HDAC7Q8WUI4 952 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 ATRIPQ8WXE1 791 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 MCEEQ96PE7 176 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 KLHL5Q96PQ7 755 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 SEPT5Q99719 369 aaPredicted RBP10.92□□□□□ -0.66
NEK3-203ENST00000551355 TUBB2BQ9BVA1 445 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 CYP4F11Q9HBI6 524 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 IL37Q9NZH6 218 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 TMEM59LQ9UK28 342 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 AMFRQ9UKV5 643 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 COG5Q9UP83 839 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 SCML2Q9UQR0 700 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 ASB3Q9Y575 518 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 TSC2P49815 1807 aa10.92□□□□□ -0.66
NEK3-203ENST00000551355 FAM92AA1XBS5 289 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 DPYSL4O14531 572 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 PROSCO94903 275 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 GLUD1P00367 558 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 CSH1P0DML2 217 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 CSH2P0DML3 217 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 PDGFRAP16234 1089 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 GPD1P21695 349 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 YWHAQP27348 245 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 SDC4P31431 198 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 RFC1P35251 1148 aaPredicted RBP10.91□□□□□ -0.66
NEK3-203ENST00000551355 PPP3CCP48454 512 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 ZNF143P52747 638 aaPredicted RBP10.91□□□□□ -0.66
NEK3-203ENST00000551355 EPHB3P54753 998 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 DAOAP59103 153 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 ERVFC1P60507 584 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 MLLT1Q03111 559 aaPredicted RBP10.91□□□□□ -0.66
NEK3-203ENST00000551355 DDR2Q16832 855 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 C2CD6Q53TS8 623 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 DNTTIP2Q5QJE6 756 aaKnown RBP10.91□□□□□ -0.66
NEK3-203ENST00000551355 PLPP4Q5VZY2 271 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 LILRA6Q6PI73 481 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 PEX26Q7Z412 305 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 ITIH5Q86UX2 942 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 MON1AQ86VX9 555 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 SLC35F6Q8N357 371 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 PDZD8Q8NEN9 1154 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 OVCA2Q8WZ82 227 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 PPP2R3CQ969Q6 453 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 TIFAQ96CG3 184 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 CDK5RAP1Q96SZ6 601 aaKnown RBP10.91□□□□□ -0.66
NEK3-203ENST00000551355 NAPGQ99747 312 aaPredicted RBP10.91□□□□□ -0.66
NEK3-203ENST00000551355 CNPY3Q9BT09 278 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 RHOBTB2Q9BYZ6 727 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 IRX2Q9BZI1 471 aaPredicted RBP10.91□□□□□ -0.66
NEK3-203ENST00000551355 ULBP1Q9BZM6 244 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 NKX2-4Q9H2Z4 354 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 PRO3102Q9H379 93 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 PLEKHA4Q9H4M7 779 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 POPDC2Q9HBU9 364 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 METTL5Q9NRN9 209 aaKnown RBP10.91□□□□□ -0.66
NEK3-203ENST00000551355 TMEM30AQ9NV96 361 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.91□□□□□ -0.66
NEK3-203ENST00000551355 UXTQ9UBK9 157 aaPredicted RBP10.91□□□□□ -0.66
NEK3-203ENST00000551355 DNAI1Q9UI46 699 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 MTUS1Q9ULD2 1270 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 STAP1Q9ULZ2 295 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 SLC27A5Q9Y2P5 690 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.91□□□□□ -0.66
NEK3-203ENST00000551355 ALG6Q9Y672 507 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 CAPN6Q9Y6Q1 641 aa10.91□□□□□ -0.66
NEK3-203ENST00000551355 PTPRSQ13332 1948 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 TMEM265A0A087WTH1 108 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 CCDC66A2RUB6 948 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 C2CD4BA6NLJ0 364 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 CAPN9O14815 690 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 GRM6O15303 877 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 TGM5O43548 720 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 SPOPO43791 374 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 DAB1O75553 588 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 GABBR2O75899 941 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 RNF8O76064 485 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 VNN2O95498 520 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 LTFP02788 710 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 USP17L7P0C7H9 530 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 PRLRP16471 622 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 PSMA2P25787 234 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 NOS2P35228 1153 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 PBX2P40425 430 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 MATKP42679 507 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 PTPN9P43378 593 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 RPL7AP62424 266 aaKnown RBP10.9□□□□□ -0.66
NEK3-203ENST00000551355 MESDQ14696 234 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 RPS6KA1Q15418 735 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 TAF12Q16514 161 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 MEI1Q5TIA1 1274 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 LRRC38Q5VT99 294 aa10.9□□□□□ -0.66
NEK3-203ENST00000551355 SYT10Q6XYQ8 523 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms