RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PTPN1P18031 435 aaKnown RBP12.04□□□□□ -0.48
RAB5C-208ENST00000551338 TFE3P19532 575 aaPredicted RBP12.04□□□□□ -0.48
RAB5C-208ENST00000551338 ACAT1P24752 427 aaKnown RBP12.04□□□□□ -0.48
RAB5C-208ENST00000551338 SDC4P31431 198 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 RAB27AP51159 221 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 HDAC4P56524 1084 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 GNGT1P63211 74 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 ADCY1Q08828 1119 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 IFFO1Q0D2I5 559 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 PTK7Q13308 1070 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 LPIN1Q14693 890 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 NOMO1Q15155 1222 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 LRRC31Q6UY01 552 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 ARCQ7LC44 396 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 PIGZQ86VD9 579 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 SCUBE3Q8IX30 993 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 PCSK9Q8NBP7 692 aaKnown RBP12.04□□□□□ -0.48
RAB5C-208ENST00000551338 UHMK1Q8TAS1 419 aaKnown RBP12.04□□□□□ -0.48
RAB5C-208ENST00000551338 PKNOX2Q96KN3 472 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 TMEM121Q9BTD3 319 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 CFHR5Q9BXR6 569 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 FOXP3Q9BZS1 431 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 DNAI2Q9GZS0 605 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 ADAM7Q9H2U9 754 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 CENPHQ9H3R5 247 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 RSAD1Q9HA92 442 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 PCDH18Q9HCL0 1135 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 CRTAC1Q9NQ79 661 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.04□□□□□ -0.48
RAB5C-208ENST00000551338 DNAJC17Q9NVM6 304 aaKnown RBP12.04□□□□□ -0.48
RAB5C-208ENST00000551338 NINJ2Q9NZG7 142 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 SAE1Q9UBE0 346 aaPredicted RBP12.04□□□□□ -0.48
RAB5C-208ENST00000551338 DDX20Q9UHI6 824 aaKnown RBP12.04□□□□□ -0.48
RAB5C-208ENST00000551338 NOVA2Q9UNW9 492 aaKnown RBP12.04□□□□□ -0.48
RAB5C-208ENST00000551338 UTRNP46939 3433 aa12.04□□□□□ -0.48
RAB5C-208ENST00000551338 ARL5CA6NH57 179 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 CASTOR2A6NHX0 329 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 CLDN5O00501 218 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 ZNF623O75123 536 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 CAND2O75155 1236 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 DAB1O75553 588 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 CAPN15O75808 1086 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 CLCNKBP51801 687 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 GDF10P55107 478 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 GPS1Q13098 491 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 ITGA7Q13683 1181 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 CA9Q16790 459 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 ZC3H12AQ5D1E8 599 aaKnown RBP12.03□□□□□ -0.48
RAB5C-208ENST00000551338 MDH1BQ5I0G3 518 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 RNASEH2BQ5TBB1 312 aaKnown RBP12.03□□□□□ -0.48
RAB5C-208ENST00000551338 NPNTQ6UXI9 565 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 EPS8L3Q8TE67 593 aaKnown RBP12.03□□□□□ -0.48
RAB5C-208ENST00000551338 CENPIQ92674 756 aaPredicted RBP12.03□□□□□ -0.48
RAB5C-208ENST00000551338 RNF157Q96PX1 679 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 TBCBQ99426 244 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 NCAPGQ9BPX3 1015 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 SYT15Q9BQS2 421 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 CALN1Q9BXU9 219 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 DUSP16Q9BY84 665 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 TSPYL1Q9H0U9 437 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 C10orf88Q9H8K7 445 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 TRMT13Q9NUP7 481 aaKnown RBP12.03□□□□□ -0.48
RAB5C-208ENST00000551338 BCCIPQ9P287 314 aaKnown RBP eCLIP12.03□□□□□ -0.48
RAB5C-208ENST00000551338 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.03□□□□□ -0.48
RAB5C-208ENST00000551338 PLXNA3P51805 1871 aa12.03□□□□□ -0.48
RAB5C-208ENST00000551338 DCDC2CA8MYV0 355 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 SGK1O00141 431 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 MDM4O15151 490 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 EIF3HO15372 352 aaKnown RBP eCLIP12.02□□□□□ -0.49
RAB5C-208ENST00000551338 CABYRO75952 493 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 BEST1O76090 585 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 NPR3P17342 541 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 IL4RP24394 825 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 HPDP32754 393 aaPredicted RBP12.02□□□□□ -0.49
RAB5C-208ENST00000551338 IRAK1P51617 712 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 ACLYP53396 1101 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 ATXN1P54253 815 aaKnown RBP12.02□□□□□ -0.49
RAB5C-208ENST00000551338 EIF3EP60228 445 aaKnown RBP12.02□□□□□ -0.49
RAB5C-208ENST00000551338 MAGOHP61326 146 aaKnown RBP12.02□□□□□ -0.49
RAB5C-208ENST00000551338 PPP2R2AP63151 447 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 ADIGQ0VDE8 80 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 KRT81Q14533 505 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 PDK2Q15119 407 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 BOLA3Q53S33 107 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 OTUD1Q5VV17 481 aaPredicted RBP12.02□□□□□ -0.49
RAB5C-208ENST00000551338 SCYL2Q6P3W7 929 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 CD300LGQ6UXG3 332 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 LEKR1Q6ZMV7 388 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 CLEC20AQ6ZU45 233 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 CROCCP2Q86T23 111 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 FAM35AQ86V20 835 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 VSIG1Q86XK7 387 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 RELL1Q8IUW5 271 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 UNC45BQ8IWX7 931 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 TMEM86AQ8N2M4 240 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 ZCCHC9Q8N567 271 aaKnown RBP12.02□□□□□ -0.49
RAB5C-208ENST00000551338 ARFGAP2Q8N6H7 521 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 PQLC3Q8N755 202 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 KCTD13Q8WZ19 329 aa12.02□□□□□ -0.49
RAB5C-208ENST00000551338 PRCCQ92733 491 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms