RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 CNTN6Q9UQ52 1028 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 SCML2Q9UQR0 700 aa16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 NUP210Q8TEM1 1887 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-211ENST00000551063 KANSL1LA0AUZ9 987 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 MAN2B1O00754 1011 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 GFRA3O60609 400 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 SETSIPP0DME0 302 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 GLULP15104 373 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 MTF1Q14872 753 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 TCP11X2Q5H9J9 407 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 MIIPQ5JXC2 388 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 HECTD3Q5T447 861 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 CDKAL1Q5VV42 579 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 CCDC186Q7Z3E2 898 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 PIGZQ86VD9 579 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 TTC30AQ86WT1 665 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 RIN3Q8TB24 985 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 CSGALNACT1Q8TDX6 532 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 CYP2S1Q96SQ9 504 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 FAM83CQ9BQN1 747 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 CRACR2AQ9BSW2 395 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 OSBPL6Q9BZF3 934 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 C8orf33Q9H7E9 229 aaPredicted RBP16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 MRPS17Q9Y2R5 130 aaKnown RBP16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 USP3Q9Y6I4 520 aa16.27■□□□□ 0.2
PRPF40B-211ENST00000551063 F5P12259 2224 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 PROB1E7EW31 1015 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 XPO1O14980 1071 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 ABL1P00519 1130 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 SLC9A1P19634 815 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 PON1P27169 355 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 MFAP3P55082 362 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 MYL5Q02045 173 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 TYRO3Q06418 890 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 BST2Q10589 180 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 PDGFRLQ15198 375 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 KLHL40Q2TBA0 621 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 HSP90AA4PQ58FG1 418 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 CAVIN1Q6NZI2 390 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 CC2D1AQ6P1N0 951 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 LCLAT1Q6UWP7 414 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 ZNF852Q6ZMS4 543 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 DDX42Q86XP3 938 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 PJA1Q8NG27 643 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 SH3RF2Q8TEC5 729 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 NELL2Q99435 816 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 LTB4R2Q9NPC1 389 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 UBE2TQ9NPD8 197 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 CYLDQ9NQC7 956 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 TLR8Q9NR97 1041 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 PIAS3Q9Y6X2 628 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 CACNA1HO95180 2353 aa16.26■□□□□ 0.19
PRPF40B-211ENST00000551063 GREB1Q4ZG55 1949 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 STK25O00506 426 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 CYP26A1O43174 497 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 MBL2P11226 248 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 PLA2G4AP47712 749 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 PSEN1P49768 467 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 PDE4CQ08493 712 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 CNGA2Q16280 664 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 PKDCCQ504Y2 493 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 RAB41Q5JT25 222 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 TFAP2BQ92481 460 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 ZFYVE19Q96K21 471 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 FOXQ1Q9C009 403 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 RNF38Q9H0F5 515 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 CHORDC1Q9UHD1 332 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 SIT1Q9Y3P8 196 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 CPQQ9Y646 472 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 OBSL1O75147 1896 aa16.25■□□□□ 0.19
PRPF40B-211ENST00000551063 SHISA7A6NL88 538 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 RNF225M0QZC1 329 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 LEFTY2O00292 366 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 COCHO43405 550 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 TLR5O60602 858 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 KRT5P13647 590 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 BRD2P25440 801 aaKnown RBP16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 NBL1P41271 181 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 MAGEA9P43362 315 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 MEA1Q16626 185 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 ITPRIPL2Q3MIP1 535 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 RALGPS2Q86X27 583 aaPredicted RBP16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 CCDC105Q8IYK2 499 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 OSCP1Q8WVF1 389 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 SHC3Q92529 594 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 NAT10Q9H0A0 1025 aaKnown RBP16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 SIX2Q9NPC8 291 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 HPS4Q9NQG7 708 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 GKN1Q9NS71 199 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 FANCLQ9NW38 375 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 GTSE1Q9NYZ3 720 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 CLIC5Q9NZA1 410 aa16.24■□□□□ 0.19
PRPF40B-211ENST00000551063 COL4A2P08572 1712 aa16.23■□□□□ 0.19
PRPF40B-211ENST00000551063 M0QYV0 167 aa16.23■□□□□ 0.19
PRPF40B-211ENST00000551063 PI15O43692 258 aa16.23■□□□□ 0.19
PRPF40B-211ENST00000551063 TPM2P07951 284 aa16.23■□□□□ 0.19
PRPF40B-211ENST00000551063 TARSP26639 723 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-211ENST00000551063 CTHP32929 405 aa16.23■□□□□ 0.19
PRPF40B-211ENST00000551063 IFNAR2P48551 515 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms