RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 USP17L7P0C7H9 530 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 ARID5AQ03989 594 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 TAF3Q5VWG9 929 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 MTSS1LQ765P7 747 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 PASD1Q8IV76 773 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 ARID3BQ8IVW6 561 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 CMTM8Q8IZV2 173 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 SIX6OS1Q8N1H7 587 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 RSAD2Q8WXG1 361 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 FGF14Q92915 247 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 SMARCD2Q92925 531 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 HSFY1Q96LI6 401 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 ASB16Q96NS5 453 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 EDEM3Q9BZQ6 932 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 ZFP14Q9HCL3 533 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 TLR8Q9NR97 1041 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 ST7Q9NRC1 585 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 USP3Q9Y6I4 520 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 DENND4CQ5VZ89 1909 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 NCANO14594 1321 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 TRAV19A0A0A6YYK7 116 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 C2orf78A6NCI8 922 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 ZBED1O96006 694 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 LCP1P13796 627 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 HDCP19113 662 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 AVPR1AP37288 418 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 ADIGQ0VDE8 80 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 HTR4Q13639 388 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 FIGNQ5HY92 759 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 TANGO2Q6ICL3 276 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 CCDC186Q7Z3E2 898 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 NOP9Q86U38 636 aaKnown RBP17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 ARL14EPQ8N8R7 260 aaPredicted RBP17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 BAP1Q92560 729 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 NXPE3Q969Y0 559 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 CYP2S1Q96SQ9 504 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 KXD1Q9BQD3 176 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 ULBP1Q9BZM6 244 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 MYO6Q9UM54 1294 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 CEP83Q9Y592 693 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 NUMBLQ9Y6R0 609 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 ANAPC1Q9H1A4 1944 aa17.08■□□□□ 0.32
CHMP1A-209ENST00000550872 PATJQ8NI35 1801 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 PIK3R2O00459 728 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 DPYSL4O14531 572 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 GABBR2O75899 941 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 ZDHHC11BP0C7U3 371 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 CCDC172P0C7W6 258 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 FERP16591 822 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 VIPR2P41587 438 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 ACADSBP45954 432 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 PM20D1Q6GTS8 502 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 ZNF677Q86XU0 584 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 FMNL3Q8IVF7 1028 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 EPS8L1Q8TE68 723 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 STK32AQ8WU08 396 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 CPLX3Q8WVH0 158 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 DDX1Q92499 740 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 IQCDQ96DY2 449 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 RPP25Q9BUL9 199 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 SLC4A5Q9BY07 1137 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 TRIM5Q9C035 493 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 TTYH3Q9C0H2 523 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 SMG9Q9H0W8 520 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 LHX5Q9H2C1 402 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 TRPV4Q9HBA0 871 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 OBSL1O75147 1896 aa17.07■□□□□ 0.32
CHMP1A-209ENST00000550872 A0A1W2PQH9 124 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 LRRC53A6NM62 1247 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 ECI2O75521 394 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 CKMP06732 381 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 MMEP08473 750 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 PFKLP17858 780 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 FCARP24071 287 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 WEE1P30291 646 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 PLA2G5P39877 138 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 PGFP49763 221 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 PSEN1P49768 467 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 HECTD3Q5T447 861 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 SFMBT2Q5VUG0 894 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 SNX30Q5VWJ9 437 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 SARM1Q6SZW1 724 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 SCD5Q86SK9 330 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 ARHGAP18Q8N392 663 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 SLC44A3Q8N4M1 653 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 WDTC1Q8N5D0 677 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 TMEM35BQ8NCS4 154 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 C1orf131Q8NDD1 294 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 SLC20A1Q8WUM9 679 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 NDRG1Q92597 394 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 E2F7Q96AV8 911 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 ELSPBP1Q96BH3 223 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 NOX5Q96PH1 765 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 SLC22A12Q96S37 553 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 PLA2G2FQ9BZM2 168 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 NMUR1Q9HB89 426 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 CNGB3Q9NQW8 809 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 CYTH4Q9UIA0 394 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 MUTYHQ9UIF7 546 aa17.06■□□□□ 0.32
CHMP1A-209ENST00000550872 NAGPAQ9UK23 515 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms