RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SEMA4GQ9NTN9 838 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 TRPM5Q9NZQ8 1165 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 GCNT4Q9P109 453 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 NFE2L3Q9Y4A8 694 aa14.26□□□□□ -0.13
NUP188-211ENST00000550219 HELZP42694 1942 aaKnown RBP14.25□□□□□ -0.13
NUP188-211ENST00000550219 DMXL1Q9Y485 3027 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.25□□□□□ -0.13
NUP188-211ENST00000550219 A8MXQ7 604 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 CLDN5O00501 218 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 SLC16A3O15427 465 aaKnown RBP14.25□□□□□ -0.13
NUP188-211ENST00000550219 ATG13O75143 517 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 RPP40O75818 363 aaKnown RBP14.25□□□□□ -0.13
NUP188-211ENST00000550219 AKAP3O75969 853 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 ZNF18P17022 549 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 DRD1P21728 446 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 GNL1P36915 607 aaPredicted RBP14.25□□□□□ -0.13
NUP188-211ENST00000550219 RAP1GAPP47736 663 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 PDE6CP51160 858 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 GALK1P51570 392 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 CACNA2D1P54289 1103 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 MARSP56192 900 aaKnown RBP14.25□□□□□ -0.13
NUP188-211ENST00000550219 CCDC6Q16204 474 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 EML3Q32P44 896 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 CDKAL1Q5VV42 579 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 PRR23CQ6ZRP0 262 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 EXOC4Q96A65 974 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 ELMO3Q96BJ8 720 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 SPATA17Q96L03 361 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 SMYD3Q9H7B4 428 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 SMPD4Q9NXE4 827 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 ARHGAP26Q9UNA1 814 aa14.25□□□□□ -0.13
NUP188-211ENST00000550219 AXIN1O15169 862 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 TACC1O75410 805 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 NFATC1O95644 943 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 GNA14O95837 355 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 PTPN1P18031 435 aaKnown RBP14.24□□□□□ -0.13
NUP188-211ENST00000550219 PSMC2P35998 433 aaKnown RBP14.24□□□□□ -0.13
NUP188-211ENST00000550219 SEC13P55735 322 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 ENPEPQ07075 957 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 TPD52L1Q16890 204 aaPredicted RBP14.24□□□□□ -0.13
NUP188-211ENST00000550219 ZNF699Q32M78 642 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 LUZP1Q86V48 1076 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 NETO1Q8TDF5 533 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 GAB3Q8WWW8 586 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 ZNF516Q92618 1163 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 EEF2KMTQ96G04 330 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 RTKNQ9BST9 563 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 MED10Q9BTT4 135 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 ELOVL4Q9GZR5 314 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 SAMSN1Q9NSI8 373 aaKnown RBP14.24□□□□□ -0.13
NUP188-211ENST00000550219 FANCLQ9NW38 375 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 EHD2Q9NZN4 543 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 FRMD4BQ9Y2L6 1034 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 CPQQ9Y646 472 aa14.24□□□□□ -0.13
NUP188-211ENST00000550219 PTPRDP23468 1912 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 LRRIQ3A6PVS8 624 aaPredicted RBP14.23□□□□□ -0.13
NUP188-211ENST00000550219 BECN2A8MW95 431 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 LEFTY2O00292 366 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 LRP3O75074 770 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 HOXA6P31267 233 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 TAF10Q12962 218 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 NR1H3Q13133 447 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 CSRP2Q16527 193 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 AASDHQ4L235 1098 aaPredicted RBP14.23□□□□□ -0.13
NUP188-211ENST00000550219 TDRD10Q5VZ19 366 aaKnown RBP14.23□□□□□ -0.13
NUP188-211ENST00000550219 CEP135Q66GS9 1140 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 KBTBD6Q86V97 674 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 FAM186BQ8IYM0 893 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 B3GALNT2Q8NCR0 500 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 PLEKHO2Q8TD55 490 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 EZH1Q92800 747 aaPredicted RBP14.23□□□□□ -0.13
NUP188-211ENST00000550219 ACDQ96AP0 544 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 C8orf48Q96LL4 319 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 SLITRK1Q96PX8 696 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 TTLL2Q9BWV7 592 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 RBSNQ9H1K0 784 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 ARRDC1-AS1Q9H2J1 176 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 LINC00597Q9H2U6 94 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 METTL14Q9HCE5 456 aaKnown RBP14.23□□□□□ -0.13
NUP188-211ENST00000550219 TMEM30AQ9NV96 361 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 GREB1Q4ZG55 1949 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 ANAPC1Q9H1A4 1944 aa14.23□□□□□ -0.13
NUP188-211ENST00000550219 ATP8B3O60423 1300 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 FRYLO94915 3013 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 ZNF840PA6NDX5 716 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 GDF9O60383 454 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 EPB41P11171 864 aaKnown RBP14.22□□□□□ -0.13
NUP188-211ENST00000550219 MBL2P11226 248 aaPredicted RBP14.22□□□□□ -0.13
NUP188-211ENST00000550219 ATICP31939 592 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 CDH8P55286 799 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 NOP14P78316 857 aaKnown RBP14.22□□□□□ -0.13
NUP188-211ENST00000550219 ZXDBP98169 803 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 DMC1Q14565 340 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 SF3A2Q15428 464 aaKnown RBP14.22□□□□□ -0.13
NUP188-211ENST00000550219 FBXO43Q4G163 708 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 ZNF667Q5HYK9 610 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 CACNA2D4Q7Z3S7 1137 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 FAM35AQ86V20 835 aa14.22□□□□□ -0.13
NUP188-211ENST00000550219 C12orf50Q8NA57 414 aaPredicted RBP14.22□□□□□ -0.13
NUP188-211ENST00000550219 TMC2Q8TDI7 906 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms