RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 C8orf34Q49A92 452 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 EMC10Q5UCC4 262 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 TDRD10Q5VZ19 366 aaKnown RBP10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 LMBRD2Q68DH5 695 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 CCDC73Q6ZRK6 1079 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 DDX42Q86XP3 938 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 SFTPA1Q8IWL2 248 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 TMEFF1Q8IYR6 380 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 PHTF2Q8N3S3 785 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 DEFB124Q8NES8 71 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 RLN3Q8WXF3 142 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 OTUB2Q96DC9 234 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 FAM84AQ96KN4 292 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 SPACA7Q96KW9 195 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 PANK4Q9NVE7 773 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 MBD1Q9UIS9 605 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 MSRB2Q9Y3D2 182 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 CPQQ9Y646 472 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 CLIC4Q9Y696 253 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 MORC2Q9Y6X9 1032 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 PTPRJQ12913 1337 aa10.5□□□□□ -0.73
TRAFD1-207ENST00000550051 ZZEF1O43149 2961 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 F8VP50 259 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 PRPF6O94906 941 aaKnown RBP10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 CD2BP2O95400 341 aaKnown RBP10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 ADH5P11766 374 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 IDEP14735 1019 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 PTPN1P18031 435 aaKnown RBP10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 TXLNAP40222 546 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 PREPLQ4J6C6 727 aaPredicted RBP10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 SNX30Q5VWJ9 437 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 TRAPPC11Q7Z392 1133 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 C12orf40Q86WS4 652 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 WDR49Q8IV35 697 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 ETFBKMTQ8IXQ9 262 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 FRMD1Q8N878 549 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 CEP76Q8TAP6 659 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 OVCA2Q8WZ82 227 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 SLITRK1Q96PX8 696 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 MMS19Q96T76 1030 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 FGFBP2Q9BYJ0 223 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 SNX25Q9H3E2 840 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 ARHGEF4Q9NR80 690 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 IL37Q9NZH6 218 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 CFAP97Q9P2B7 532 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 SLC6A14Q9UN76 642 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 STARD13Q9Y3M8 1113 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 NME7Q9Y5B8 376 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 ASPMQ8IZT6 3477 aa10.49□□□□□ -0.73
TRAFD1-207ENST00000550051 ADAMTS9Q9P2N4 1935 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 H0Y626 953 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 HOXC11O43248 304 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 AP5Z1O43299 807 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 RTN3O95197 1032 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 TRIM16O95361 564 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 STAU1O95793 577 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 ABL1P00519 1130 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 SERPINF2P08697 491 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 YWHAQP27348 245 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 HOXD13P35453 343 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 GAD2Q05329 585 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 RESTQ13127 1097 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 DUOXA1Q1HG43 343 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 MDH1BQ5I0G3 518 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 LY6G5CQ5SRR4 150 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 LYSMD4Q5XG99 296 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 LRSAM1Q6UWE0 723 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 SLC36A4Q6YBV0 504 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 NUDT18Q6ZVK8 323 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 STXBP4Q6ZWJ1 553 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 HS2ST1Q7LGA3 356 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 TRMT11Q7Z4G4 463 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 TTC30AQ86WT1 665 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 CBWD2Q8IUF1 395 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 CCDC65Q8IXS2 484 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 NUP93Q8N1F7 819 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 PDZD8Q8NEN9 1154 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 ZNF507Q8TCN5 953 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 TMC2Q8TDI7 906 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 CLIC6Q96NY7 704 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 MRPL45Q9BRJ2 306 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 ELOVL4Q9GZR5 314 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 CAPN10Q9HC96 672 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 TMEM30AQ9NV96 361 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 COMMD8Q9NX08 183 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 SMPD4Q9NXE4 827 aa10.48□□□□□ -0.73
TRAFD1-207ENST00000550051 TBC1D3BA6NDS4 549 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 COCHO43405 550 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 CAPNS1P04632 268 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 MBL2P11226 248 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 ITPKAP23677 461 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 RDXP35241 583 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 STAT6P42226 847 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 MAPK8P45983 427 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 TUBP50607 506 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 CACNA2D1P54289 1103 aa10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 SNRPFP62306 86 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 COL9A2Q14055 689 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 HNRNPDQ14103 355 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-207ENST00000550051 WDR72Q3MJ13 1102 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms