RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 BUB1BO60566 1050 aaPredicted RBP18.26■□□□□ 0.51
LETMD1-220ENST00000549686 PALMO75781 387 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 DNAJB1P25685 340 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 KLRC2P26717 231 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 ALDH1A3P47895 512 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 DAOAP59103 153 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 PIGHQ14442 188 aaPredicted RBP18.26■□□□□ 0.51
LETMD1-220ENST00000549686 ACAP1Q15027 740 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 DDR2Q16832 855 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 PLPP4Q5VZY2 271 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 CCDC149Q6ZUS6 474 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 DENND5BQ6ZUT9 1274 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 BEND5Q7L4P6 421 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 PHLDB2Q86SQ0 1253 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 SLC35F6Q8N357 371 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 ARHGAP18Q8N392 663 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 LRRC57Q8N9N7 239 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.26■□□□□ 0.51
LETMD1-220ENST00000549686 TIFAQ96CG3 184 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 IRX2Q9BZI1 471 aaPredicted RBP18.26■□□□□ 0.51
LETMD1-220ENST00000549686 ULBP1Q9BZM6 244 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 CYP4F11Q9HBI6 524 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 IL37Q9NZH6 218 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 CHORDC1Q9UHD1 332 aaPredicted RBP18.26■□□□□ 0.51
LETMD1-220ENST00000549686 TMEM59LQ9UK28 342 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 SLC27A5Q9Y2P5 690 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 JRKLQ9Y4A0 524 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 CEP290O15078 2479 aa18.26■□□□□ 0.51
LETMD1-220ENST00000549686 PIK3R2O00459 728 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 PROSCO94903 275 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 GLUD1P00367 558 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 RFC1P35251 1148 aaPredicted RBP18.25■□□□□ 0.51
LETMD1-220ENST00000549686 MLLT1Q03111 559 aaPredicted RBP18.25■□□□□ 0.51
LETMD1-220ENST00000549686 VEPH1Q14D04 833 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 LLGL2Q6P1M3 1020 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 ELMSAN1Q6PJG2 1045 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 CHRDL2Q6WN34 429 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 GPRIN1Q7Z2K8 1008 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 NIPA2Q8N8Q9 360 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 CRISPLD1Q9H336 500 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 TMEM51Q9NW97 253 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 DPP7Q9UHL4 492 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 SCML2Q9UQR0 700 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 YIPF1Q9Y548 306 aa18.25■□□□□ 0.51
LETMD1-220ENST00000549686 FAM92AA1XBS5 289 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 CTAGE9A4FU28 777 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 C2CD4BA6NLJ0 364 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 DPYSL4O14531 572 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 TGM5O43548 720 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 DAB1O75553 588 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 GPD1P21695 349 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 CASQ1P31415 396 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 CDR1P51861 262 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 ZNF143P52747 638 aaPredicted RBP18.24■□□□□ 0.51
LETMD1-220ENST00000549686 RPL7AP62424 266 aaKnown RBP18.24■□□□□ 0.51
LETMD1-220ENST00000549686 YWHAZP63104 245 aaKnown RBP18.24■□□□□ 0.51
LETMD1-220ENST00000549686 MESDQ14696 234 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 LILRA6Q6PI73 481 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 SYT10Q6XYQ8 523 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 PEX26Q7Z412 305 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 TTC9BQ8N6N2 239 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 KIF18AQ8NI77 898 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 HDAC7Q8WUI4 952 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 NAPGQ99747 312 aaPredicted RBP18.24■□□□□ 0.51
LETMD1-220ENST00000549686 CNPY3Q9BT09 278 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 POPDC2Q9HBU9 364 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 RRN3Q9NYV6 651 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 DNAI1Q9UI46 699 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 FBXW11Q9UKB1 542 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 AMFRQ9UKV5 643 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 ASB3Q9Y575 518 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 NLRC5Q86WI3 1866 aa18.24■□□□□ 0.51
LETMD1-220ENST00000549686 HIDE1A8MVS5 230 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 MIF4GDA9UHW6 222 aaKnown RBP18.23■□□□□ 0.51
LETMD1-220ENST00000549686 SEC24AO95486 1093 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 USP17L7P0C7H9 530 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 CSH1P0DML2 217 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 CSH2P0DML3 217 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 PDGFRAP16234 1089 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 ATF6P18850 670 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 YWHAQP27348 245 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 SDC4P31431 198 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 PTPN9P43378 593 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 GPR15P49685 360 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 PSEN1P49768 467 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 CAMK1Q14012 370 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 PTPROQ16827 1216 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 SPRED2Q7Z698 418 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 ITIH5Q86UX2 942 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 MON1AQ86VX9 555 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 ARNTL2Q8WYA1 636 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 KHSRPQ92945 711 aaKnown RBP eCLIP18.23■□□□□ 0.519e-6■■□□□ 14.4
LETMD1-220ENST00000549686 FAM149B1Q96BN6 582 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 SLC2A13Q96QE2 648 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 WDR24Q96S15 920 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 TTLL2Q9BWV7 592 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 PLEKHA4Q9H4M7 779 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.23■□□□□ 0.51
LETMD1-220ENST00000549686 STAP1Q9ULZ2 295 aa18.23■□□□□ 0.51
LETMD1-220ENST00000549686 INSL5Q9Y5Q6 135 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms