RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 XYLT2Q9H1B5 865 aa10.21□□□□□ -0.77
GCN1-205ENST00000548821 ARRDC1-AS1Q9H2J1 176 aa10.21□□□□□ -0.77
GCN1-205ENST00000548821 CFAP97Q9P2B7 532 aa10.21□□□□□ -0.77
GCN1-205ENST00000548821 DEC1Q9P2X7 70 aa10.21□□□□□ -0.77
GCN1-205ENST00000548821 MMP17Q9ULZ9 603 aa10.21□□□□□ -0.77
GCN1-205ENST00000548821 PCDHA5Q9Y5H7 936 aa10.21□□□□□ -0.77
GCN1-205ENST00000548821 PTPRJQ12913 1337 aa10.21□□□□□ -0.78
GCN1-205ENST00000548821 NUP210Q8TEM1 1887 aaPredicted RBP10.21□□□□□ -0.78
GCN1-205ENST00000548821 A0A1B0GVL5 298 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 TBC1D3BA6NDS4 549 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 LRRIQ3A6PVS8 624 aaPredicted RBP10.2□□□□□ -0.78
GCN1-205ENST00000548821 NPC1O15118 1278 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 CETN3O15182 167 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 ACTN4O43707 911 aaKnown RBP10.2□□□□□ -0.78
GCN1-205ENST00000548821 RHOBTB3O94955 611 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 SMC2O95347 1197 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 RALAP11233 206 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 ADH5P11766 374 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 F5P12259 2224 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 TGM1P22735 817 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 NR2F2P24468 414 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 PPP1R2P41236 205 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 PLA2G4AP47712 749 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 YWHAEP62258 255 aaKnown RBP10.2□□□□□ -0.78
GCN1-205ENST00000548821 ADAM9Q13443 819 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 STIM1Q13586 685 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 C2orf27AQ580R0 203 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 SV2AQ7L0J3 742 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 FAM35AQ86V20 835 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 GUF1Q8N442 669 aaKnown RBP10.2□□□□□ -0.78
GCN1-205ENST00000548821 PATJQ8NI35 1801 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 USP33Q8TEY7 942 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 WHAMMQ8TF30 809 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 CHFRQ96EP1 664 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 CNOT6LQ96LI5 555 aaKnown RBP10.2□□□□□ -0.78
GCN1-205ENST00000548821 SLC22A12Q96S37 553 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 DCLK3Q9C098 648 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 ZNF518BQ9C0D4 1074 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 RNF38Q9H0F5 515 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 LINC00597Q9H2U6 94 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 CSNK1G1Q9HCP0 422 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 ARHGEF4Q9NR80 690 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 IL37Q9NZH6 218 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 BCCIPQ9P287 314 aaKnown RBP eCLIP10.2□□□□□ -0.78
GCN1-205ENST00000548821 CHORDC1Q9UHD1 332 aaPredicted RBP10.2□□□□□ -0.78
GCN1-205ENST00000548821 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.2□□□□□ -0.78
GCN1-205ENST00000548821 ZNF292O60281 2723 aa10.2□□□□□ -0.78
GCN1-205ENST00000548821 EP300Q09472 2414 aaPredicted RBP10.19□□□□□ -0.78
GCN1-205ENST00000548821 GVINP1Q7Z2Y8 2422 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 SCN1AP35498 2009 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 TCHHQ07283 1943 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 TICRRQ7Z2Z1 1910 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 FAM92AA1XBS5 289 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 OTOL1A6NHN0 477 aaPredicted RBP10.19□□□□□ -0.78
GCN1-205ENST00000548821 KHNYNO15037 678 aaKnown RBP10.19□□□□□ -0.78
GCN1-205ENST00000548821 KAT7O95251 611 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 CAVIN2O95810 425 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 ASS1P00966 412 aaKnown RBP10.19□□□□□ -0.78
GCN1-205ENST00000548821 EPB41P11171 864 aaKnown RBP10.19□□□□□ -0.78
GCN1-205ENST00000548821 RDXP35241 583 aaKnown RBP10.19□□□□□ -0.78
GCN1-205ENST00000548821 CHKAP35790 457 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 ZNF132P52740 706 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 SLC5A3P53794 718 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 USP46P62068 366 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 COG7P83436 770 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 DMWDQ09019 674 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 CETN1Q12798 172 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 LMAN2Q12907 356 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 CRY1Q16526 586 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 EDRF1Q3B7T1 1238 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 KRT39Q6A163 491 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 KLHDC10Q6PID8 442 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 SLC36A4Q6YBV0 504 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 HTR3DQ70Z44 454 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 LPCAT2Q7L5N7 544 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 ACOT1Q86TX2 421 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 FAM186BQ8IYM0 893 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 PGBD3Q8N328 593 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 ZNF276Q8N554 614 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 CYFIP2Q96F07 1278 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 HNRNPABQ99729 332 aaKnown RBP10.19□□□□□ -0.78
GCN1-205ENST00000548821 UBXN6Q9BZV1 441 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 KCTD10Q9H3F6 313 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 TMEM8AQ9HCN3 771 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 KRT82Q9NSB4 513 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 SMPD4Q9NXE4 827 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 DNMT3LQ9UJW3 386 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 SCML2Q9UQR0 700 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 HPSEQ9Y251 543 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 FANCMQ8IYD8 2048 aa10.19□□□□□ -0.78
GCN1-205ENST00000548821 FAM237AA0A1B0GTK4 181 aa10.18□□□□□ -0.78
GCN1-205ENST00000548821 DCDC2BA2VCK2 349 aa10.18□□□□□ -0.78
GCN1-205ENST00000548821 CLDN5O00501 218 aa10.18□□□□□ -0.78
GCN1-205ENST00000548821 HOXC11O43248 304 aaPredicted RBP10.18□□□□□ -0.78
GCN1-205ENST00000548821 COCHO43405 550 aa10.18□□□□□ -0.78
GCN1-205ENST00000548821 HCRTO43612 131 aa10.18□□□□□ -0.78
GCN1-205ENST00000548821 KLRC4O43908 158 aa10.18□□□□□ -0.78
GCN1-205ENST00000548821 TLR5O60602 858 aa10.18□□□□□ -0.78
GCN1-205ENST00000548821 ZNF217O75362 1048 aa10.18□□□□□ -0.78
GCN1-205ENST00000548821 CYBBP04839 570 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms