RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 PANK4Q9NVE7 773 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 FAM13BQ9NYF5 915 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 ASB3Q9Y575 518 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 WNT6Q9Y6F9 365 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 FBN2P35556 2912 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 OBSL1O75147 1896 aa15.03■□□□□ -0
PTCH1-217ENST00000548420 BOD1L1Q8NFC6 3051 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 IGHV1OR15-9A0A0B4J2B8 117 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 TTC26A0AVF1 554 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 ANKRD63C9JTQ0 380 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 HNRNPDLO14979 420 aaKnown RBP15.02■□□□□ -0
PTCH1-217ENST00000548420 OGTO15294 1046 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 FGF19O95750 216 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 LIG4P49917 911 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 EHHADHQ08426 723 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 BYSLQ13895 437 aaKnown RBP15.02■□□□□ -0
PTCH1-217ENST00000548420 ZBTB6Q15916 424 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 EML3Q32P44 896 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 BAP1Q92560 729 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 BICD1Q96G01 975 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 SPATA32Q96LK8 384 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 CDC6Q99741 560 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 PYM1Q9BRP8 204 aaKnown RBP15.02■□□□□ -0
PTCH1-217ENST00000548420 SCAND2PQ9GZW5 306 aaPredicted RBP15.02■□□□□ -0
PTCH1-217ENST00000548420 MRPL44Q9H9J2 332 aaKnown RBP15.02■□□□□ -0
PTCH1-217ENST00000548420 HPSEQ9Y251 543 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 PCDHB13Q9Y5F0 798 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 AK5Q9Y6K8 562 aa15.02■□□□□ -0
PTCH1-217ENST00000548420 TCHHQ07283 1943 aa15.02□□□□□ -0.01
PTCH1-217ENST00000548420 CITO14578 2027 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 TCRBV21S2A2A0A5A6 115 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 CILPO75339 1184 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 SLFN14P0C7P3 912 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 IDEP14735 1019 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 CDR1P51861 262 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 CASP5P51878 434 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 NUCB2P80303 420 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 MRPS21P82921 87 aaKnown RBP15.01□□□□□ -0.01
PTCH1-217ENST00000548420 POU5F1Q01860 360 aaKnown RBP15.01□□□□□ -0.01
PTCH1-217ENST00000548420 KCNA1Q09470 495 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 ALCAMQ13740 583 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 RTP5Q14D33 572 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 SEZ6Q53EL9 994 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 L1TD1Q5T7N2 865 aaKnown RBP15.01□□□□□ -0.01
PTCH1-217ENST00000548420 ARHGAP40Q5TG30 622 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 SLFN12LQ6IEE8 588 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 CC2D1AQ6P1N0 951 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-217ENST00000548420 TMPRSS12Q86WS5 348 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 CCDC65Q8IXS2 484 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 PGBD3Q8N328 593 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 FGF11Q92914 225 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 EXOC4Q96A65 974 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 TSPAN18Q96SJ8 248 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 FGFBP2Q9BYJ0 223 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 LINC00597Q9H2U6 94 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 GAREM1Q9H706 876 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 CD93Q9NPY3 652 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 SLC38A7Q9NVC3 462 aa15.01□□□□□ -0.01
PTCH1-217ENST00000548420 CPSF3Q9UKF6 684 aaKnown RBP15.01□□□□□ -0.01
PTCH1-217ENST00000548420 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.01□□□□□ -0.01
PTCH1-217ENST00000548420 TIMM13Q9Y5L4 95 aaPredicted RBP15.01□□□□□ -0.01
PTCH1-217ENST00000548420 ITPR3Q14573 2671 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 MTMR11A4FU01 709 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 TRIM66O15016 1216 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 ACTN4O43707 911 aaKnown RBP15□□□□□ -0.01
PTCH1-217ENST00000548420 ZNF883P0CG24 379 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 HARSP12081 509 aaKnown RBP15□□□□□ -0.01
PTCH1-217ENST00000548420 ATF6P18850 670 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 RPL9P32969 192 aaKnown RBP15□□□□□ -0.01
PTCH1-217ENST00000548420 TIE1P35590 1138 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 TNFSF9P41273 254 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 BFSP1Q12934 665 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 GPR17Q13304 367 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 MTF1Q14872 753 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 ENOX2Q16206 610 aaKnown RBP15□□□□□ -0.01
PTCH1-217ENST00000548420 TXNDC8Q6A555 127 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 SLC36A4Q6YBV0 504 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 ERICH1Q86X53 443 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 CCDC26Q8TAB7 109 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 OSCP1Q8WVF1 389 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 ZNF419Q96HQ0 510 aaPredicted RBP15□□□□□ -0.01
PTCH1-217ENST00000548420 ACCSQ96QU6 501 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 IKZF4Q9H2S9 585 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 DUS2Q9NX74 493 aaKnown RBP15□□□□□ -0.01
PTCH1-217ENST00000548420 HSPBP1Q9NZL4 362 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 TBC1D7Q9P0N9 293 aa15□□□□□ -0.01
PTCH1-217ENST00000548420 A0A1B0GVL5 298 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 PVALEFA0A1B0GWK0 134 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 A0A1W2PQ27 194 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 A0A1W2PQ64 194 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 ENO4A6NNW6 628 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 TISP43B9A030 160 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 OAZ2O95190 189 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 F11P03951 625 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 CXCL8P10145 99 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 PFKFB1P16118 471 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 GABRG2P18507 467 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 CDC25CP30307 473 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 AVPR1AP37288 418 aa14.99□□□□□ -0.01
PTCH1-217ENST00000548420 MATR3P43243 847 aaKnown RBP eCLIP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms