RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 MYLK2Q9H1R3 596 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 DACT1Q9NYF0 836 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 DNAJB11Q9UBS4 358 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 SERTAD3Q9UJW9 196 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 GPR52Q9Y2T5 361 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 PCDHGB3Q9Y5G1 929 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 SNX14Q9Y5W7 946 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 TOP2BQ02880 1626 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 SHROOM2Q13796 1616 aa4.82□□□□□ -1.64
PTCH1-216ENST00000548379 COL15A1P39059 1388 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 WDR27A2RRH5 827 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 PIP5K1BO14986 540 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 CBFA2T3O75081 653 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 COQ9O75208 318 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 NTSR2O95665 410 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 ADORA2AP29274 412 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 ITGA8P53708 1063 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 PRKAG1P54619 331 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 GUCY1B3Q02153 619 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 SPATS1Q496A3 300 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 MIIPQ5JXC2 388 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 ATG16L2Q8NAA4 619 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 MBD3L2Q8NHZ7 208 aaPredicted RBP4.81□□□□□ -1.64
PTCH1-216ENST00000548379 SSH3Q8TE77 659 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 ASB10Q8WXI3 467 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 CCT6BQ92526 530 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 WDR24Q96S15 920 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 KATNAL1Q9BW62 490 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 ACTRT3Q9BYD9 372 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 SLC25A32Q9H2D1 315 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 TP63Q9H3D4 680 aaPredicted RBP4.81□□□□□ -1.64
PTCH1-216ENST00000548379 SCAF8Q9UPN6 1271 aaKnown RBP4.81□□□□□ -1.64
PTCH1-216ENST00000548379 DGKBQ9Y6T7 804 aa4.81□□□□□ -1.64
PTCH1-216ENST00000548379 CARMIL1Q5VZK9 1371 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 ARID1BQ8NFD5 2236 aaPredicted RBP4.8□□□□□ -1.64
PTCH1-216ENST00000548379 DIP2BQ9P265 1576 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 PIPSLA2A3N6 862 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 UNC119BA6NIH7 251 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 TRIM38O00635 465 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 PCDH17O14917 1159 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 PPM1DO15297 605 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 RGS10O43665 173 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 ERBB2P04626 1255 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 HGFP14210 728 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 EPHA3P29320 983 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 HTR7P34969 479 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 PTGS2P35354 604 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 RENBPP51606 427 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 NXPH1P58417 271 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 TIRAPP58753 221 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 ITIH3Q06033 890 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 GRM1Q13255 1194 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 NRN1LQ496H8 165 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 TIGD2Q4W5G0 525 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 FNDC7Q5VTL7 733 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 KIAA0895LQ68EN5 471 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 MRGPREQ86SM8 312 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 TMEM171Q8WVE6 324 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 OSCP1Q8WVF1 389 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 RSC1A1Q92681 617 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 HAS1Q92839 578 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 TBC1D20Q96BZ9 403 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 EVI5LQ96CN4 794 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 PLEKHG4BQ96PX9 1271 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 TMOD4Q9NZQ9 345 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 LRFN1Q9P244 771 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 ABCC2Q92887 1545 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 TEX14Q8IWB6 1497 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 UACAQ9BZF9 1416 aa4.8□□□□□ -1.64
PTCH1-216ENST00000548379 ADGRA2Q96PE1 1338 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 CCDC189A1A4V9 331 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 ASNA1O43681 348 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 TNFRSF6BO95407 300 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 GATMP50440 423 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 PGDP52209 483 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 PNLIPRP1P54315 467 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 DGCR2P98153 550 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 FOXE3Q13461 319 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 CLCA4Q14CN2 919 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 POSTNQ15063 836 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 SF3B3Q15393 1217 aaKnown RBP4.79□□□□□ -1.64
PTCH1-216ENST00000548379 LY6KQ17RY6 165 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 ABHD17BQ5VST6 288 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 JMJD6Q6NYC1 403 aaPredicted RBP4.79□□□□□ -1.64
PTCH1-216ENST00000548379 MAVSQ7Z434 540 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 IZUMO1Q8IYV9 350 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 CPXCR1Q8N123 301 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 OR1N1Q8NGS0 311 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 SUN3Q8TAQ9 357 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 MYCBPAPQ8TBZ2 947 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 OTUD7AQ8TE49 926 aaPredicted RBP4.79□□□□□ -1.64
PTCH1-216ENST00000548379 SOCS4Q8WXH5 440 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 RSPRY1Q96DX4 576 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 PTCD3Q96EY7 689 aaKnown RBP4.79□□□□□ -1.64
PTCH1-216ENST00000548379 PRPF18Q99633 342 aaKnown RBP4.79□□□□□ -1.64
PTCH1-216ENST00000548379 C17orf80Q9BSJ5 609 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 VN1R3Q9BXE9 311 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 TPSD1Q9BZJ3 242 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 ZCWPW1Q9H0M4 648 aa4.79□□□□□ -1.64
PTCH1-216ENST00000548379 TRIM36Q9NQ86 728 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms