RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, human

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEPDC4-205	ENST00000548313	SLC9A4	Q6AI14	798 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	SRL	Q86TD4	932 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	CAND1	Q86VP6	1230 aa	Known RBP	4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	LRRC71	Q8N4P6	559 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	FANCB	Q8NB91	859 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	DEPTOR	Q8TB45	409 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	XAGE5	Q8WWM1	108 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	TBC1D5	Q92609	795 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	R3HDM4	Q96D70	268 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	DPCD	Q9BVM2	203 aa	Predicted RBP	4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	VN1R3	Q9BXE9	311 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	ZBTB26	Q9HCK0	441 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	CHST12	Q9NRB3	414 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	DLL3	Q9NYJ7	618 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	DNAJB11	Q9UBS4	358 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	ZNHIT2	Q9UHR6	403 aa		4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	DRG1	Q9Y295	367 aa	Known RBP	4.98	□□□□□ -1.61
DEPDC4-205	ENST00000548313	QSOX1	O00391	747 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	MGST3	O14880	152 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	SNX2	O60749	519 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	ERBB2	P04626	1255 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	JUP	P14923	745 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	CD19	P15391	556 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	CYP2C18	P33260	490 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	HTR3A	P46098	478 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	PGD	P52209	483 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	ITGA8	P53708	1063 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	ELL	P55199	621 aa	Predicted RBP	4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	STK3	Q13188	491 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	SYCP2L	Q5T4T6	812 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	MANEAL	Q5VSG8	457 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	ZNF804A	Q7Z570	1209 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	SAMD3	Q8N6K7	520 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	ABHD11	Q8NFV4	315 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	ZNF384	Q8TF68	577 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	NAF1	Q96HR8	494 aa	Known RBP	4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	SNX27	Q96L92	541 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	SGCZ	Q96LD1	299 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	RIOX1	Q9H6W3	641 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	DUSP22	Q9NRW4	184 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	SEMA4G	Q9NTN9	838 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	CCNL1	Q9UK58	526 aa	Predicted RBP	4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	ST3GAL5	Q9UNP4	418 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	HPSE	Q9Y251	543 aa		4.97	□□□□□ -1.61
DEPDC4-205	ENST00000548313	HNRNPDL	O14979	420 aa	Known RBP	4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	NCK2	O43639	380 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	COQ9	O75208	318 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	EBLN1	P0CF75	366 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	HGF	P14210	728 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	BMP5	P22003	454 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	ITPKB	P27987	946 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	CLK3	P49761	638 aa	Known RBP	4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	EEFSEC	P57772	596 aa	Known RBP	4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	BRD3	Q15059	726 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	AKNAD1	Q5T1N1	836 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	RRAGB	Q5VZM2	374 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	TOGARAM2	Q6ZUX3	1019 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313		Q6ZWC4	215 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	TXLNB	Q8N3L3	684 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	CYP2W1	Q8TAV3	490 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	NELL1	Q92832	810 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	LRRC46	Q96FV0	321 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	BBC3	Q96PG8	261 aa	Predicted RBP	4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	HIST1H2AA	Q96QV6	131 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	GDF15	Q99988	308 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	FSD1L	Q9BXM9	530 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	CERS4	Q9HA82	394 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	TMOD4	Q9NZQ9	345 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	MAN2B2	Q9Y2E5	1009 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	CEP83	Q9Y592	693 aa		4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313	POLR2A	P24928	1970 aa	Known RBP	4.96	□□□□□ -1.62
DEPDC4-205	ENST00000548313		A0A087WZ62	844 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313		H0YIZ8	118 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	PROP1	O75360	226 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	NUDT3	O95989	172 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	NPS	P0C0P6	89 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	HARS	P12081	509 aa	Known RBP	4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	MYCL	P12524	364 aa	Predicted RBP	4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	GPD1	P21695	349 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	DRD4	P21917	467 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	EEF1G	P26641	437 aa	Known RBP	4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	GK	P32189	559 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	SUMO2	P61956	95 aa	Known RBP	4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	PMS2P11	Q13670	270 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	KCNAB1	Q14722	419 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	CLCA4	Q14CN2	919 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	TMEM63B	Q5T3F8	832 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	TSTD2	Q5T7W7	516 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	MORC1	Q86VD1	984 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	RASAL3	Q86YV0	1011 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	SIRT6	Q8N6T7	355 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	ZNF566	Q969W8	418 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	SLC39A13	Q96H72	371 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	ZBTB45	Q96K62	511 aa	Predicted RBP	4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	SELENOO	Q9BVL4	669 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	ARFGAP3	Q9NP61	516 aa		4.95	□□□□□ -1.62
DEPDC4-205	ENST00000548313	TM7SF3	Q9NS93	570 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms