RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 TTC16Q8NEE8 873 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 SEMA4DQ92854 862 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 FBXO32Q969P5 355 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 P2RY11Q96G91 374 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 HHIPQ96QV1 700 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 ARID3AQ99856 593 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 CCSER2Q9H7U1 834 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 THADAQ6YHU6 1953 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 CKAP5Q14008 2032 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 USP24Q9UPU5 2620 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 IKBKBO14920 756 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 CALUO43852 315 aaPredicted RBP13.2□□□□□ -0.3
GCN1-204ENST00000548132 CILPO75339 1184 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 AP1G2O75843 785 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 PMS1P54277 932 aaKnown RBP13.2□□□□□ -0.3
GCN1-204ENST00000548132 NRLP54845 237 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 ENPEPQ07075 957 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 CC2D1AQ6P1N0 951 aaPredicted RBP13.2□□□□□ -0.3
GCN1-204ENST00000548132 FAM186BQ8IYM0 893 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 ABCA7Q8IZY2 2146 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 NUP93Q8N1F7 819 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 CRYBG2Q8N1P7 616 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 RPLP0P6Q8NHW5 317 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 SPATA20Q8TB22 786 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 OVCA2Q8WZ82 227 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 TAF4BQ92750 862 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
GCN1-204ENST00000548132 CD101Q93033 1021 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 EEF2KMTQ96G04 330 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 NIF3L1Q9GZT8 377 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 OSER1Q9NX31 292 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 CFAP97Q9P2B7 532 aa13.2□□□□□ -0.3
GCN1-204ENST00000548132 ACACBO00763 2458 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 K7EQS6 105 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 CYP26A1O43174 497 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 RTN3O95197 1032 aaPredicted RBP13.19□□□□□ -0.3
GCN1-204ENST00000548132 NFATC1O95644 943 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 DRD1P21728 446 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 YWHAQP27348 245 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 TUBP50607 506 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 PDE6CP51160 858 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 GRSF1Q12849 480 aaKnown RBP eCLIP13.19□□□□□ -0.3
GCN1-204ENST00000548132 PPP2R5DQ14738 602 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 RSPO4Q2I0M5 234 aaPredicted RBP13.19□□□□□ -0.3
GCN1-204ENST00000548132 EDRF1Q3B7T1 1238 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 PRR23BQ6ZRT6 265 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 INTS8Q75QN2 995 aaKnown RBP13.19□□□□□ -0.3
GCN1-204ENST00000548132 UNC93AQ86WB7 457 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
GCN1-204ENST00000548132 KIAA1958Q8N8K9 716 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 SLITRK1Q96PX8 696 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 DUSP9Q99956 384 aaKnown RBP13.19□□□□□ -0.3
GCN1-204ENST00000548132 NMUR1Q9HB89 426 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 TMEM8AQ9HCN3 771 aa13.19□□□□□ -0.3
GCN1-204ENST00000548132 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.19□□□□□ -0.3
GCN1-204ENST00000548132 ATP8B3O60423 1300 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 MAP1BP46821 2468 aaKnown RBP13.18□□□□□ -0.3
GCN1-204ENST00000548132 PCDH15Q96QU1 1955 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 TRIM49BA6NDI0 452 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 MBL2P11226 248 aaPredicted RBP13.18□□□□□ -0.3
GCN1-204ENST00000548132 ADORA2BP29275 332 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 PPP3CCP48454 512 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 SPEM2Q0P670 501 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 SIM2Q14190 667 aaPredicted RBP13.18□□□□□ -0.3
GCN1-204ENST00000548132 DHCR24Q15392 516 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 SGSM1Q2NKQ1 1148 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 CBWD6Q4V339 395 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 COBLL1Q53SF7 1204 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 CBWD3Q5JTY5 395 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 CBWD5Q5RIA9 395 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 ERMP1Q7Z2K6 904 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 ETFBKMTQ8IXQ9 262 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 UBR7Q8N806 425 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 PDZD8Q8NEN9 1154 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 USP33Q8TEY7 942 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 GAB3Q8WWW8 586 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 HNRNPABQ99729 332 aaKnown RBP13.18□□□□□ -0.3
GCN1-204ENST00000548132 MED10Q9BTT4 135 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 MMRN2Q9H8L6 949 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 HCN2Q9UL51 889 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 FRMD4BQ9Y2L6 1034 aa13.18□□□□□ -0.3
GCN1-204ENST00000548132 CCDC163A0A0D9SF12 145 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 EPN2O95208 641 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 RETP07949 1114 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 CD58P19256 250 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 PRCPP42785 496 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 SLC6A11P48066 632 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 MXI1P50539 228 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 MAP3K7CLP57077 242 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 DMC1Q14565 340 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 RHBDF2Q6PJF5 856 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 SYT13Q7L8C5 426 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 KBTBD6Q86V97 674 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 BBS7Q8IWZ6 715 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 CYLDQ9NQC7 956 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 EHD2Q9NZN4 543 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 GMEB2Q9UKD1 530 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 ATP6V1DQ9Y5K8 247 aa13.17□□□□□ -0.3
GCN1-204ENST00000548132 MDM4O15151 490 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms