RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 LRRC53A6NM62 1247 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 NRG2O14511 850 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 LSM8O95777 96 aaKnown RBP11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 ZDHHC11BP0C7U3 371 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 SSTR3P32745 418 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 CDH5P33151 784 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 ACADSBP45954 432 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 RPL34P49207 117 aaKnown RBP11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 PSEN1P49768 467 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 TUBP50607 506 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 TKTL1P51854 596 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 CDR2Q01850 454 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 ADIGQ0VDE8 80 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 TRIM14Q14142 442 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 STXBP5Q5T5C0 1151 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 PMF1Q6P1K2 205 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 DENND1BQ6P3S1 775 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 MON1AQ86VX9 555 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 VSTM4Q8IW00 320 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 SIX6OS1Q8N1H7 587 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 ARHGAP18Q8N392 663 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 ZNF397Q8NF99 534 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 SMARCD2Q92925 531 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 NXPE3Q969Y0 559 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 MCRS1Q96EZ8 462 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 ASB16Q96NS5 453 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 NOX5Q96PH1 765 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 UHRF1Q96T88 793 aaPredicted RBP11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 TRIM5Q9C035 493 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 PDCL3Q9H2J4 239 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 CNGB3Q9NQW8 809 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 AIPL1Q9NZN9 384 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 IGSF9Q9P2J2 1179 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 CAPN11Q9UMQ6 739 aa11.98□□□□□ -0.49
CALCOCO1-208ENST00000547988 TRAV19A0A0A6YYK7 116 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 ANHXE9PGG2 379 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 FBXO21O94952 628 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 ZBED1O96006 694 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 GYPCP04921 128 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 CFHP08603 1231 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 RGS7P49802 495 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 SNX16P57768 344 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 ZBED6P86452 979 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 ARID5AQ03989 594 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 PDCLQ13371 301 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 HTR4Q13639 388 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 ASIC2Q16515 512 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 SFMBT2Q5VUG0 894 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 PM20D1Q6GTS8 502 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 TRIM72Q6ZMU5 477 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 PASD1Q8IV76 773 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 CMTM8Q8IZV2 173 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 GJD3Q8N144 294 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 MAB21L3Q8N8X9 362 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 TMEM35BQ8NCS4 154 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 ZSCAN18Q8TBC5 510 aaPredicted RBP11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 SYN2Q92777 582 aaPredicted RBP11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 E2F7Q96AV8 911 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 ZSWIM3Q96MP5 696 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 SLC4A5Q9BY07 1137 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 SLC46A2Q9BY10 475 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 TRPV4Q9HBA0 871 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 ST7Q9NRC1 585 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 GMIPQ9P107 970 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 LIMD1Q9UGP4 676 aa11.97□□□□□ -0.49
CALCOCO1-208ENST00000547988 MYOFQ9NZM1 2061 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 C2orf78A6NCI8 922 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 SART1O43290 800 aaKnown RBP11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 AP5Z1O43299 807 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 ECI2O75521 394 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 OLFM2O95897 454 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 ABL1P00519 1130 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 OAS1P00973 400 aaKnown RBP11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 MMEP08473 750 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 TPM1P09493 284 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 USP17L7P0C7H9 530 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 LCP1P13796 627 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 AVPR1AP37288 418 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 PRKCIP41743 596 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 FMO1Q01740 532 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 FAM78AQ5JUQ0 283 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 HECTD3Q5T447 861 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 TAF3Q5VWG9 929 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 TXNDC8Q6A555 127 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 POTEHQ6S545 545 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 IRF2BP2Q7Z5L9 587 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 TMEM110Q86TL2 294 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 RNF135Q8IUD6 432 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 ARID3BQ8IVW6 561 aaPredicted RBP11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 ZNF276Q8N554 614 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 C1orf131Q8NDD1 294 aaKnown RBP11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 SLC20A1Q8WUM9 679 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 IRGQQ8WZA9 623 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 ELSPBP1Q96BH3 223 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 MRFAP1L1Q96HT8 127 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 NECAB3Q96P71 396 aaPredicted RBP11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 CDK5RAP1Q96SZ6 601 aaKnown RBP11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 ULBP1Q9BZM6 244 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 KIF9Q9HAQ2 790 aa11.96□□□□□ -0.49
CALCOCO1-208ENST00000547988 KCNK12Q9HB15 430 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms