RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 NFAT5O94916 1531 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 AKAP11Q9UKA4 1901 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 SMIM35A0A1B0GVV1 85 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 EME2A4GXA9 379 aaPredicted RBP3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 FAM90A8PA6NJQ4 464 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 E5RJQ4 531 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 F5H697 171 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 QSOX1O00391 747 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 SLC43A1O75387 559 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 CLSTN1O94985 981 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 CHEK2O96017 543 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 FAM90A13PP0C7W8 464 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 FAM90A24PP0C7X0 464 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 NDUFV1P49821 464 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 HTRA4P83105 476 aaPredicted RBP3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 MC2RQ01718 297 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 STAT4Q14765 748 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 DAZAP2Q15038 168 aaPredicted RBP3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 RSPH3Q86UC2 560 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 CNGA4Q8IV77 575 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 NANOGP1Q8N7R0 232 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 POC1BQ8TC44 478 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 SSH1Q8WYL5 1049 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 CAPNS2Q96L46 248 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 ASB2Q96Q27 587 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 P2RX7Q99572 595 aaKnown RBP3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 FAM118BQ9BPY3 351 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 CDK19Q9BWU1 502 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 FAM126AQ9BYI3 521 aaPredicted RBP3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 SIK2Q9H0K1 926 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 VTA1Q9NP79 307 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 ABT1Q9ULW3 272 aaKnown RBP3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 PRKAB1Q9Y478 270 aa3.09□□□□□ -1.91
DEPDC4-204ENST00000547823 PALLDQ8WX93 1383 aa3.09□□□□□ -1.92
DEPDC4-204ENST00000547823 TTC28Q96AY4 2481 aa3.09□□□□□ -1.92
DEPDC4-204ENST00000547823 FAM208AQ9UK61 1670 aaKnown RBP3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 RGPD2P0DJD1 1756 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 SMIM22K7EJ46 135 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 GPR39O43194 453 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 SGTAO43765 313 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 BRINP1O60477 761 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 BCAR3O75815 825 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 USP1O94782 785 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 RHOP08100 348 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 ITGALP20701 1170 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 SFPQP23246 707 aaKnown RBP eCLIP3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 PCSK6P29122 969 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 CHRNA5P30532 468 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 SLC6A4P31645 630 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 MAP2K2P36507 400 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 WASP42768 502 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 EEFSECP57772 596 aaKnown RBP3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 CDC42EP1Q00587 391 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 TBCCQ15814 346 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 CERKLQ49MI3 558 aaPredicted RBP3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 CT47A1Q5JQC4 288 aaPredicted RBP3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 TOR2AQ5JU69 321 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 MIS18BP1Q6P0N0 1132 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 MIGA2Q7L4E1 593 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 PDSS2Q86YH6 399 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 CMIPQ8IY22 773 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 KCNH5Q8NCM2 988 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 ACTRT3Q9BYD9 372 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 IMPG2Q9BZV3 1241 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 TDP1Q9NUW8 608 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 RLIMQ9NVW2 624 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 TRNAU1APQ9NX07 287 aaKnown RBP3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 DNAJC28Q9NX36 388 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 DNM3Q9UQ16 869 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 RANBP2P49792 3224 aaKnown RBP3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 UNC80Q8N2C7 3258 aa3.08□□□□□ -1.92
DEPDC4-204ENST00000547823 BRCA2P51587 3418 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 AFDNP55196 1824 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 H7C1Q1 480 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 POLRMTO00411 1230 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 TLR5O60602 858 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 DDNO94850 711 aaPredicted RBP3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 CNGA1P29973 690 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 ARHGAP25P42331 645 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 MTNR1BP49286 362 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 THBS3P49746 956 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 TMF1P82094 1093 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 TMPRSS15P98073 1019 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 HOXA4Q00056 320 aaPredicted RBP3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 SRSF2Q01130 221 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 RAB39AQ14964 217 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 RHOT1Q8IXI2 618 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 CNTROBQ8N137 903 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 C8orf58Q8NAV2 365 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 C16orf52Q8NHV5 167 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 COG1Q8WTW3 980 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 TGFBRAP1Q8WUH2 860 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 CUL5Q93034 780 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 SCAMP4Q969E2 229 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 FAM136AQ96C01 138 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 VCPIP1Q96JH7 1222 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 NELL2Q99435 816 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 AMBRA1Q9C0C7 1298 aa3.07□□□□□ -1.92
DEPDC4-204ENST00000547823 TAF1DQ9H5J8 278 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms