RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TMEM171Q8WVE6 324 aa5.16□□□□□ -1.58
CCDC38-204ENST00000546816 RAPGEF4Q8WZA2 1011 aa5.16□□□□□ -1.58
CCDC38-204ENST00000546816 PPP2R3CQ969Q6 453 aa5.16□□□□□ -1.58
CCDC38-204ENST00000546816 B3GNT5Q9BYG0 378 aa5.16□□□□□ -1.58
CCDC38-204ENST00000546816 CCNL1Q9UK58 526 aaPredicted RBP5.16□□□□□ -1.58
CCDC38-204ENST00000546816 PRPF3O43395 683 aaKnown RBP5.15□□□□□ -1.59
CCDC38-204ENST00000546816 TBC1D4O60343 1298 aa5.15□□□□□ -1.59
CCDC38-204ENST00000546816 CTNND1O60716 968 aaKnown RBP5.15□□□□□ -1.59
CCDC38-204ENST00000546816 DLDP09622 509 aaKnown RBP5.15□□□□□ -1.59
CCDC38-204ENST00000546816 EN2P19622 333 aaPredicted RBP5.15□□□□□ -1.59
CCDC38-204ENST00000546816 FPR3P25089 353 aa5.15□□□□□ -1.59
CCDC38-204ENST00000546816 RBMS2Q15434 407 aaKnown RBP5.15□□□□□ -1.59
CCDC38-204ENST00000546816 RNASE12Q5GAN4 147 aaKnown RBP5.15□□□□□ -1.59
CCDC38-204ENST00000546816 ZNF398Q8TD17 642 aa5.15□□□□□ -1.59
CCDC38-204ENST00000546816 RUNDC1Q96C34 613 aa5.15□□□□□ -1.59
CCDC38-204ENST00000546816 RSPRY1Q96DX4 576 aa5.15□□□□□ -1.59
CCDC38-204ENST00000546816 PRR25Q96S07 402 aa5.15□□□□□ -1.59
CCDC38-204ENST00000546816 C17orf80Q9BSJ5 609 aa5.15□□□□□ -1.59
CCDC38-204ENST00000546816 C22orf23Q9BZE7 217 aa5.15□□□□□ -1.59
CCDC38-204ENST00000546816 GBA2Q9HCG7 927 aaPredicted RBP5.15□□□□□ -1.59
CCDC38-204ENST00000546816 TRMT13Q9NUP7 481 aaKnown RBP5.15□□□□□ -1.59
CCDC38-204ENST00000546816 USP19O94966 1318 aa5.15□□□□□ -1.59
CCDC38-204ENST00000546816 AP4M1O00189 453 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 ADAM10O14672 748 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 TBX3O15119 743 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 PRKCBP05771 671 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 HOXD9P28356 352 aaPredicted RBP5.14□□□□□ -1.59
CCDC38-204ENST00000546816 PRKAG1P54619 331 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 E2F1Q01094 437 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 LEXMQ3ZCV2 418 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 DCAF12L1Q5VU92 463 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 KIAA1161Q6NSJ0 714 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 DPY19L3Q6ZPD9 716 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 KIAA0319LQ8IZA0 1049 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 MPP5Q8N3R9 675 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.14□□□□□ -1.59
CCDC38-204ENST00000546816 DPCDQ9BVM2 203 aaPredicted RBP5.14□□□□□ -1.59
CCDC38-204ENST00000546816 CIPCQ9C0C6 399 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 TMEM60Q9H2L4 133 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 XPNPEP3Q9NQH7 507 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 STK32BQ9NY57 414 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 WWOXQ9NZC7 414 aa5.14□□□□□ -1.59
CCDC38-204ENST00000546816 DSCR3O14972 297 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 OAZ2O95190 189 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 A1BGP04217 495 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 SLC7A1P30825 629 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 THBS3P49746 956 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 PSG6Q00889 435 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 RAB32Q13637 225 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 SERPINA13PQ6UXR4 307 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 PIP4P1Q86T03 277 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 MICU3Q86XE3 530 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 OR56A3Q8NH54 315 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 EFHD1Q9BUP0 239 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 ZNF518BQ9C0D4 1074 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 ASIC5Q9NY37 505 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 CPNE7Q9UBL6 633 aa5.13□□□□□ -1.59
CCDC38-204ENST00000546816 CAPN8A6NHC0 703 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 FGAP02671 866 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 MYCLP12524 364 aaPredicted RBP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 GKP32189 559 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 ALDH5A1P51649 535 aaPredicted RBP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 BCAT1P54687 386 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 SUMO3P55854 103 aaPredicted RBP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 NANOS2P60321 138 aaKnown RBP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 SRSF1Q07955 248 aaKnown RBP eCLIP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 CCNIQ14094 377 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 ZNF268Q14587 947 aaPredicted RBP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 FAM187BQ17R55 369 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 CXorf57Q6NSI4 855 aaKnown RBP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 BCDIN3DQ7Z5W3 292 aaKnown RBP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 SMRP1Q8NCR6 262 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 ADAMTS18Q8TE60 1221 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 CTHRC1Q96CG8 243 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 A1CFQ9NQ94 594 aaKnown RBP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 ZSCAN32Q9NX65 697 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 DNMT3BQ9UBC3 853 aaKnown RBP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 NOB1Q9ULX3 412 aaKnown RBP5.12□□□□□ -1.59
CCDC38-204ENST00000546816 L1RE1Q9UN81 338 aa5.12□□□□□ -1.59
CCDC38-204ENST00000546816 A6NNZ2 444 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 PMPCBO75439 489 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 ALPLP05186 524 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 GHRHRQ02643 423 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 CNN3Q15417 329 aaKnown RBP5.11□□□□□ -1.59
CCDC38-204ENST00000546816 CERCAMQ5T4B2 595 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 FAM102BQ5T8I3 360 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 APOA5Q6Q788 366 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 C9orf47Q6ZRZ4 202 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 KCTD20Q7Z5Y7 419 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 SIRT6Q8N6T7 355 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 DNAJB14Q8TBM8 379 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 CUL5Q93034 780 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 TRIM5Q9C035 493 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 AMFRQ9UKV5 643 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 DRG1Q9Y295 367 aaKnown RBP5.11□□□□□ -1.59
CCDC38-204ENST00000546816 CDY1Q9Y6F8 540 aa5.11□□□□□ -1.59
CCDC38-204ENST00000546816 TRIM43BA6NCK2 446 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 CD8B2A6NJW9 211 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 BTBD19C9JJ37 291 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 TMEM232C9JQI7 657 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms