RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 FLAD1Q8NFF5 587 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 OR6P1Q8NGX9 317 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ABHD8Q96I13 439 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 DEPDC7Q96QD5 511 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 SRP68Q9UHB9 627 aaKnown RBP13.23□□□□□ -0.29
PTCH1-212ENST00000546744 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 CBX6O95503 412 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 LDLRP01130 860 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ZNF12P17014 697 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ACADSBP45954 432 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 KLHL12Q53G59 568 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ZNF394Q53GI3 561 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 TTC23Q5W5X9 447 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ADGRF4Q8IZF3 695 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 VPS37AQ8NEZ2 397 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 RDM1Q8NG50 284 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 SLC30A5Q8TAD4 765 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 AGR3Q8TD06 166 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 TCP10LQ8TDR4 215 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 TADA1Q96BN2 335 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 WNK4Q96J92 1243 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 GANQ9H2C0 597 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 CLEC4MQ9H2X3 399 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-212ENST00000546744 LRRC4BQ9NT99 713 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 UMODL1Q5DID0 1318 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 PDE2AO00408 941 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-212ENST00000546744 LRRC37A3O60309 1634 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 SNAP91O60641 907 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ASNSP08243 561 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ATP6V1E1P36543 226 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ITGA1P56199 1179 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ZNF543Q08ER8 600 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 NTRK3Q16288 839 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ANGPTL8Q6UXH0 198 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 NUP93Q8N1F7 819 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 TMC2Q8TDI7 906 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 PRCCQ92733 491 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-212ENST00000546744 MCEEQ96PE7 176 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 SEMA6BQ9H3T3 888 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 LRRC40Q9H9A6 602 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 MBD2Q9UBB5 411 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 E5RI56 91 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 MPOP05164 745 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ABCB1P08183 1280 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-212ENST00000546744 RBP1P09455 135 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 UQCRBP14927 111 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 TCN1P20061 433 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-212ENST00000546744 MMP14P50281 582 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 RIPPLY1Q0D2K3 151 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 ZNF846Q147U1 533 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 TNIP3Q96KP6 325 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 INPP4AQ96PE3 977 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-212ENST00000546744 KIAA1683Q9H0B3 1180 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 PRDM16Q9HAZ2 1276 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 AGPAT3Q9NRZ7 376 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 DNAJB4Q9UDY4 337 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 KLHL3Q9UH77 587 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 FBXO40Q9UH90 709 aa13.23□□□□□ -0.29
PTCH1-212ENST00000546744 VWA5AO00534 786 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 CYP11B2P19099 503 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 BGNP21810 368 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 DMPKQ09013 629 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 SLC5A9Q2M3M2 681 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 ZNF568Q3ZCX4 644 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 COBLL1Q53SF7 1204 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 TBCELQ5QJ74 424 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 EGFL6Q8IUX8 553 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 MED15Q96RN5 788 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 SLC25A23Q9BV35 468 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 AKT3Q9Y243 479 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 PCDHA10Q9Y5I2 948 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 RAD54BQ9Y620 910 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 TBC1D12O60347 775 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 ALDH1A3P47895 512 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 CCNHP51946 323 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-212ENST00000546744 FCHO2Q0JRZ9 810 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 DENND1BQ6P3S1 775 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 ZBTB33Q86T24 672 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 EXOC3L1Q86VI1 746 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 DHFR2Q86XF0 187 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 SFRP1Q8N474 314 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 AMER2Q8N7J2 671 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 ADCY4Q8NFM4 1077 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 PDCD6IPQ8WUM4 868 aaKnown RBP13.22□□□□□ -0.29
PTCH1-212ENST00000546744 ZNF560Q96MR9 790 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
PTCH1-212ENST00000546744 NEUROG2Q9H2A3 272 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 KIAA1257Q9ULG3 409 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 ZSCAN5CA6NGD5 496 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-212ENST00000546744 ZNF862O60290 1169 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 SP100P23497 879 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-212ENST00000546744 RFX5P48382 616 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-212ENST00000546744 ARPC4P59998 168 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 RPL26P61254 145 aaKnown RBP13.22□□□□□ -0.29
PTCH1-212ENST00000546744 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
PTCH1-212ENST00000546744 GRAPQ13588 217 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 TJAP1Q5JTD0 557 aa13.22□□□□□ -0.29
PTCH1-212ENST00000546744 HABP4Q5JVS0 413 aaKnown RBP13.22□□□□□ -0.29
PTCH1-212ENST00000546744 PPP4R4Q6NUP7 873 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms