RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 DDX43Q9NXZ2 648 aaKnown RBP11.56□□□□□ -0.56
TMEM116-203ENST00000546537 DPP3Q9NY33 737 aa11.56□□□□□ -0.56
TMEM116-203ENST00000546537 TRPM5Q9NZQ8 1165 aa11.56□□□□□ -0.56
TMEM116-203ENST00000546537 TBC1D14Q9P2M4 693 aa11.56□□□□□ -0.56
TMEM116-203ENST00000546537 SPTA1P02549 2419 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 HNRNPDLO14979 420 aaKnown RBP11.55□□□□□ -0.56
TMEM116-203ENST00000546537 BCAT2O15382 392 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-203ENST00000546537 NCAM1P13591 858 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 ACAT1P24752 427 aaKnown RBP11.55□□□□□ -0.56
TMEM116-203ENST00000546537 NCKAP1LP55160 1127 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 SEMG2Q02383 582 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 RAD51AP2Q09MP3 1159 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 C6orf118Q5T5N4 469 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 EGFLAMQ63HQ2 1017 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 KCNK18Q7Z418 384 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 METTL3Q86U44 580 aaKnown RBP11.55□□□□□ -0.56
TMEM116-203ENST00000546537 SKAP1Q86WV1 359 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 SPATA2LQ8IUW3 424 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-203ENST00000546537 CHPFQ8IZ52 775 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 PDCL2Q8N4E4 241 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 NAT16Q8N8M0 369 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 IGSF22Q8N9C0 903 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 FAM181AQ8N9Y4 354 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 OTUB2Q96DC9 234 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 WBP1Q96G27 269 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 SPATA17Q96L03 361 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 ACOX2Q99424 681 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 MSTO1Q9BUK6 570 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 MIR1-1HGQ9H1L0 117 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 SMPD4Q9NXE4 827 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 WSB2Q9NYS7 404 aaPredicted RBP11.55□□□□□ -0.56
TMEM116-203ENST00000546537 CFAP97Q9P2B7 532 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 DEC1Q9P2X7 70 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 KNTC1P50748 2209 aa11.55□□□□□ -0.56
TMEM116-203ENST00000546537 CABIN1Q9Y6J0 2220 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 ZNF840PA6NDX5 716 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 B8ZZF3 427 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 H0YCG3 227 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 PYCARD-AS1I3L0S3 204 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 HOXC11O43248 304 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-203ENST00000546537 OAS1P00973 400 aaKnown RBP11.54□□□□□ -0.56
TMEM116-203ENST00000546537 GRK6P43250 576 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 MAGEA11P43364 429 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 PPP3CCP48454 512 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 USP46P62068 366 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 MYL7Q01449 175 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 RTP5Q14D33 572 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 CCDC142Q17RM4 750 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 TAF1BQ53T94 588 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-203ENST00000546537 CCDC157Q569K6 752 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 DCAF12L1Q5VU92 463 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 BTBD8Q5XKL5 378 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 SDE2Q6IQ49 451 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 DDX42Q86XP3 938 aaKnown RBP eCLIP11.54□□□□□ -0.56
TMEM116-203ENST00000546537 C4orf32Q8N8J7 132 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 ENGASEQ8NFI3 743 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 ERLEC1Q96DZ1 483 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 TOE1Q96GM8 510 aaKnown RBP11.54□□□□□ -0.56
TMEM116-203ENST00000546537 CEP295NLQ96MC4 621 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 ZNF560Q96MR9 790 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 GPR174Q9BXC1 333 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 GMIPQ9P107 970 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 L1RE1Q9UN81 338 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 MYH10P35580 1976 aa11.54□□□□□ -0.56
TMEM116-203ENST00000546537 TP53BP1Q12888 1972 aaPredicted RBP11.54□□□□□ -0.56
TMEM116-203ENST00000546537 E2F8A0AVK6 867 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 METTL12A8MUP2 240 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 TRIM24O15164 1050 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 REC8O95072 547 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 WISP1O95388 367 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 HNF1BP35680 557 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 PNPLA4P41247 253 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 ACOT2P49753 483 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 CXADRP78310 365 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 TLE3Q04726 772 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 SLC39A4Q6P5W5 647 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 FAM171BQ6P995 826 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 KIAA1324Q6UXG2 1013 aaKnown RBP11.53□□□□□ -0.56
TMEM116-203ENST00000546537 DENND5BQ6ZUT9 1274 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 TMEM86AQ8N2M4 240 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 C1orf216Q8TAB5 229 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 TTLL2Q9BWV7 592 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 NRSN2Q9GZP1 204 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 ITM2CQ9NQX7 267 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 USP36Q9P275 1121 aaKnown RBP11.53□□□□□ -0.56
TMEM116-203ENST00000546537 LARSQ9P2J5 1176 aaKnown RBP11.53□□□□□ -0.56
TMEM116-203ENST00000546537 RAD54BQ9Y620 910 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 AK5Q9Y6K8 562 aa11.53□□□□□ -0.56
TMEM116-203ENST00000546537 A0A1B0GVT2 93 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 GFRA2O00451 464 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 HCRTO43612 131 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 PCDHGA12O60330 932 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 MBL2P11226 248 aaPredicted RBP11.52□□□□□ -0.57
TMEM116-203ENST00000546537 JUPP14923 745 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 FOSBP53539 338 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 RHDQ02161 417 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 TRIM29Q14134 588 aa11.52□□□□□ -0.57
TMEM116-203ENST00000546537 SF3A1Q15459 793 aaKnown RBP11.52□□□□□ -0.57
TMEM116-203ENST00000546537 KRT79Q5XKE5 535 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms