RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 EDRF1Q3B7T1 1238 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 HECTD3Q5T447 861 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 SNX30Q5VWJ9 437 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 CEP68Q76N32 757 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.09■■□□□ 1.45
CHD4-214ENST00000545942 ADGRG2Q8IZP9 1017 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 CAMKK1Q8N5S9 505 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 RPLP0P6Q8NHW5 317 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 CCDC26Q8TAB7 109 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 EZH1Q92800 747 aaPredicted RBP24.09■■□□□ 1.45
CHD4-214ENST00000545942 CYP3A43Q9HB55 503 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 CSNK1G1Q9HCP0 422 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 FAM49BQ9NUQ9 324 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 DLL3Q9NYJ7 618 aa24.09■■□□□ 1.45
CHD4-214ENST00000545942 FAM92AA1XBS5 289 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 COCHO43405 550 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 PXNP49023 591 aaPredicted RBP24.08■■□□□ 1.44
CHD4-214ENST00000545942 TUBP50607 506 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 LMNB2Q03252 620 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 INCA1Q0VD86 236 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 FMR1NBQ8N0W7 255 aaPredicted RBP24.08■■□□□ 1.44
CHD4-214ENST00000545942 C12orf29Q8N999 325 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 CCDC150Q8NCX0 1101 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 ZMIZ2Q8NF64 920 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 ACDQ96AP0 544 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 NIF3L1Q9GZT8 377 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 MMRN2Q9H8L6 949 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 APOBEC3GQ9HC16 384 aaKnown RBP24.08■■□□□ 1.44
CHD4-214ENST00000545942 TMEM8AQ9HCN3 771 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 RMND1Q9NWS8 449 aa24.08■■□□□ 1.44
CHD4-214ENST00000545942 GOLGA6L4A6NEF3 574 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 LRP3O75074 770 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 BEST1O76090 585 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 CYP17A1P05093 508 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 ZDHHC11BP0C7U3 371 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 GTF2H1P32780 548 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 OPRD1P41143 372 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 MAP3K7CLP57077 242 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 SPEM2Q0P670 501 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 PNOCQ13519 176 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 RSPO4Q2I0M5 234 aaPredicted RBP24.07■■□□□ 1.44
CHD4-214ENST00000545942 SYT13Q7L8C5 426 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 DGLUCYQ7Z3D6 616 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 SMYD4Q8IYR2 804 aaPredicted RBP24.07■■□□□ 1.44
CHD4-214ENST00000545942 NT5C1AQ9BXI3 368 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 FBXO44Q9H4M3 255 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 PARD6AQ9NPB6 346 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 GMIPQ9P107 970 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 TBC1D14Q9P2M4 693 aa24.07■■□□□ 1.44
CHD4-214ENST00000545942 HELZP42694 1942 aaKnown RBP24.07■■□□□ 1.44
CHD4-214ENST00000545942 E2F8A0AVK6 867 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 PRR5-ARHGAP8B1AHC4 643 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 SCAMP3O14828 347 aaKnown RBP24.06■■□□□ 1.44
CHD4-214ENST00000545942 FAM200BP0CF97 657 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 SDHBP21912 280 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 MCCD1P59942 119 aaPredicted RBP24.06■■□□□ 1.44
CHD4-214ENST00000545942 ARHGAP8P85298 464 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 DHCR24Q15392 516 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 GAB4Q2WGN9 574 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 KRT39Q6A163 491 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 GAB3Q8WWW8 586 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 ZFRQ96KR1 1074 aaKnown RBP24.06■■□□□ 1.44
CHD4-214ENST00000545942 TWNKQ96RR1 684 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 HNRNPABQ99729 332 aaKnown RBP24.06■■□□□ 1.44
CHD4-214ENST00000545942 CCSER2Q9H7U1 834 aa24.06■■□□□ 1.44
CHD4-214ENST00000545942 POLR3BQ9NW08 1133 aaPredicted RBP24.06■■□□□ 1.44
CHD4-214ENST00000545942 ADORA2BP29275 332 aa24.05■■□□□ 1.44
CHD4-214ENST00000545942 NUCB2P80303 420 aa24.05■■□□□ 1.44
CHD4-214ENST00000545942 FAM160A2Q8N612 972 aaPredicted RBP24.05■■□□□ 1.44
CHD4-214ENST00000545942 CYFIP2Q96F07 1278 aa24.05■■□□□ 1.44
CHD4-214ENST00000545942 EEF2KMTQ96G04 330 aa24.05■■□□□ 1.44
CHD4-214ENST00000545942 HHIPQ96QV1 700 aa24.05■■□□□ 1.44
CHD4-214ENST00000545942 DNAI2Q9GZS0 605 aa24.05■■□□□ 1.44
CHD4-214ENST00000545942 CETN3O15182 167 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 CILPO75339 1184 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 RPP40O75818 363 aaKnown RBP24.04■■□□□ 1.44
CHD4-214ENST00000545942 ADH1CP00326 375 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 EPB41P11171 864 aaKnown RBP24.04■■□□□ 1.44
CHD4-214ENST00000545942 CD58P19256 250 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 DMC1Q14565 340 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 RHBDF2Q6PJF5 856 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 CLEC20AQ6ZU45 233 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 OTUB2Q96DC9 234 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 GSDMAQ96QA5 445 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 NACA2Q9H009 215 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 TLR8Q9NR97 1041 aaKnown RBP24.04■■□□□ 1.44
CHD4-214ENST00000545942 SH3BP1Q9Y3L3 701 aa24.04■■□□□ 1.44
CHD4-214ENST00000545942 DNAH14Q0VDD8 3507 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 STX10O60499 249 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 CCDC192P0DO97 292 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 EIF2DP41214 584 aaKnown RBP24.03■■□□□ 1.44
CHD4-214ENST00000545942 PRCPP42785 496 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 MXI1P50539 228 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 COBLL1Q53SF7 1204 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 ZNF658Q5TYW1 1059 aaPredicted RBP24.03■■□□□ 1.44
CHD4-214ENST00000545942 CACNA2D4Q7Z3S7 1137 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 USP33Q8TEY7 942 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 WHAMMQ8TF30 809 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 FAXDC2Q96IV6 333 aa24.03■■□□□ 1.44
CHD4-214ENST00000545942 PNPLA8Q9NP80 782 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms