RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 TMEM51Q9NW97 253 aa15□□□□□ -0.01
VPS33A-209ENST00000544349 TIMM13Q9Y5L4 95 aaPredicted RBP15□□□□□ -0.01
VPS33A-209ENST00000544349 BRCA2P51587 3418 aa15□□□□□ -0.01
VPS33A-209ENST00000544349 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 RIPK2O43353 540 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 CHKAP35790 457 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 IFI35P80217 286 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-209ENST00000544349 SLC6A3Q01959 620 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 ACAP1Q15027 740 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 GLB1LQ6UWU2 654 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 OLFML1Q6UWY5 402 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 HOOK3Q86VS8 718 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 CCDC25Q86WR0 208 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 CCDC50Q8IVM0 306 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 FUKQ8N0W3 1084 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 DDX23Q9BUQ8 820 aaKnown RBP14.99□□□□□ -0.01
VPS33A-209ENST00000544349 ADAM7Q9H2U9 754 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 CYLDQ9NQC7 956 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 ATXN2Q99700 1313 aaKnown RBP14.99□□□□□ -0.01
VPS33A-209ENST00000544349 A0A087WUV0 522 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-209ENST00000544349 TLDC2A0PJX2 215 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 SRRM3A6NNA2 597 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-209ENST00000544349 PAPSS1O43252 624 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-209ENST00000544349 LRCH4O75427 683 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 PAX3P23760 479 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 SLCO1A2P46721 670 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 BRCC3P46736 316 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 PPP1R7Q15435 360 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 TRIP13Q15645 432 aaPredicted RBP14.99□□□□□ -0.01
VPS33A-209ENST00000544349 CCDC142Q17RM4 750 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 PLEKHG4Q58EX7 1191 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 CLLU1OSQ5K130 101 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 TXNRD3NBQ6F5E7 133 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 PAQR9Q6ZVX9 377 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 ZDHHC17Q8IUH5 632 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 SCUBE3Q8IX30 993 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 RCOR2Q8IZ40 523 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 DBF4BQ8NFT6 615 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 MAIP1Q8WWC4 291 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 HSFY1Q96LI6 401 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 DUSP16Q9BY84 665 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 CRTAC1Q9NQ79 661 aa14.99□□□□□ -0.01
VPS33A-209ENST00000544349 MTRF1LQ9UGC7 380 aaKnown RBP14.99□□□□□ -0.01
VPS33A-209ENST00000544349 C2CD4BA6NLJ0 364 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 PQBP1O60828 265 aaKnown RBP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 CAPN15O75808 1086 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 ODC1P11926 461 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 GPD1P21695 349 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 ZNF143P52747 638 aaPredicted RBP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 SLC25A11Q02978 314 aaKnown RBP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 BYSLQ13895 437 aaKnown RBP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 PAN2Q504Q3 1202 aaKnown RBP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 TRNP1Q6NT89 227 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 DCLRE1AQ6PJP8 1040 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 B4GALNT4Q76KP1 1039 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 POLNQ7Z5Q5 900 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 SPATA18Q8TC71 538 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 RXFP2Q8WXD0 754 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 KHSRPQ92945 711 aaKnown RBP eCLIP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 SLCO2A1Q92959 643 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 RBM41Q96IZ5 413 aaKnown RBP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 SYT15Q9BQS2 421 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 HEMGNQ9BXL5 484 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 B3GNT5Q9BYG0 378 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 KLHL11Q9NVR0 708 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 ASNSD1Q9NWL6 643 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 DDX56Q9NY93 547 aaKnown RBP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 GMNCA6NCL1 334 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 I3L4J1 428 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 M0QZQ0 153 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 CLDN5O00501 218 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 ENPP3O14638 875 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 XPO1O14980 1071 aaKnown RBP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 GRAP2O75791 330 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 CYP11A1P05108 521 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 RALAP11233 206 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 GBP1P32455 592 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 ACADSBP45954 432 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 SLC20A2Q08357 652 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 MDH1BQ5I0G3 518 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 NOMO2Q5JPE7 1267 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 MICALL1Q8N3F8 863 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 PPM1EQ8WY54 764 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 PGM2Q96G03 612 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 OSBPL8Q9BZF1 889 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 DCLK3Q9C098 648 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 CDC42EP4Q9H3Q1 356 aaKnown RBP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 DNAJC17Q9NVM6 304 aaKnown RBP14.98□□□□□ -0.01
VPS33A-209ENST00000544349 TMEM161AQ9NX61 479 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 CDH9Q9ULB4 789 aa14.98□□□□□ -0.01
VPS33A-209ENST00000544349 TSC2P49815 1807 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 RNF8O76064 485 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 DDHD2O94830 711 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 CPP00450 1065 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 KRT1P04264 644 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 COL6A1P12109 1028 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 PDGFRAP16234 1089 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 IVDP26440 423 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 IL1R2P27930 398 aa14.97□□□□□ -0.01
VPS33A-209ENST00000544349 CETN2P41208 172 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms