RNA–Protein interactions for RNA: ENST00000542896.5

PDCD2-209, Transcript of programmed cell death 2, human

TSL 2 BASIC

Gene PDCD2, Length 1,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD2-209	ENST00000542896	PSAPL1	Q6NUJ1	521 aa		27.57	■■■□□ 2
PDCD2-209	ENST00000542896	TMEM92	Q6UXU6	159 aa		27.57	■■■□□ 2
PDCD2-209	ENST00000542896	C12orf40	Q86WS4	652 aa		27.57	■■■□□ 2
PDCD2-209	ENST00000542896	SFTPA1	Q8IWL2	248 aa		27.57	■■■□□ 2
PDCD2-209	ENST00000542896	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	27.57	■■■□□ 2
PDCD2-209	ENST00000542896	KCNK16	Q96T55	309 aa		27.57	■■■□□ 2
PDCD2-209	ENST00000542896	SMYD3	Q9H7B4	428 aa		27.57	■■■□□ 2
PDCD2-209	ENST00000542896	POLM	Q9NP87	494 aa	Predicted RBP	27.57	■■■□□ 2
PDCD2-209	ENST00000542896	CIZ1	Q9ULV3	898 aa	Predicted RBP	27.57	■■■□□ 2
PDCD2-209	ENST00000542896	PVALEF	A0A1B0GWK0	134 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	E2F8	A0AVK6	867 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	27.56	■■■□□ 2
PDCD2-209	ENST00000542896	CASP4	P49662	377 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	CDH8	P55286	799 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	KDSR	Q06136	332 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	MESP2	Q0VG99	397 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	ZNF699	Q32M78	642 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	HSF5	Q4G112	596 aa	Predicted RBP	27.56	■■■□□ 2
PDCD2-209	ENST00000542896	ZNF667	Q5HYK9	610 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	EOGT	Q5NDL2	527 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	HECTD3	Q5T447	861 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	FAM35A	Q86V20	835 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	IL17RC	Q8NAC3	791 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	TNIP3	Q96KP6	325 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	FAM13B	Q9NYF5	915 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	CHORDC1	Q9UHD1	332 aa	Predicted RBP	27.56	■■■□□ 2
PDCD2-209	ENST00000542896	SH3BP1	Q9Y3L3	701 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	HELZ	P42694	1942 aa	Known RBP	27.56	■■■□□ 2
PDCD2-209	ENST00000542896	EPG5	Q9HCE0	2579 aa		27.56	■■■□□ 2
PDCD2-209	ENST00000542896	LNP1	A1A4G5	178 aa		27.55	■■■□□ 2
PDCD2-209	ENST00000542896	COCH	O43405	550 aa		27.55	■■■□□ 2
PDCD2-209	ENST00000542896	HNRNPL	P14866	589 aa	Known RBP eCLIP	27.55	■■■□□ 2
PDCD2-209	ENST00000542896	GRIA2	P42262	883 aa		27.55	■■■□□ 2
PDCD2-209	ENST00000542896	AFM	P43652	599 aa		27.55	■■■□□ 2
PDCD2-209	ENST00000542896	NOVA1	P51513	510 aa	Known RBP	27.55	■■■□□ 2
PDCD2-209	ENST00000542896	SHC2	P98077	582 aa		27.55	■■■□□ 2
PDCD2-209	ENST00000542896	GAD2	Q05329	585 aa		27.55	■■■□□ 2
PDCD2-209	ENST00000542896	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	27.55	■■■□□ 2
PDCD2-209	ENST00000542896	LY6G5C	Q5SRR4	150 aa		27.55	■■■□□ 2
PDCD2-209	ENST00000542896	EMC10	Q5UCC4	262 aa		27.55	■■■□□ 2
PDCD2-209	ENST00000542896	FOXD4L3	Q6VB84	417 aa	Predicted RBP	27.55	■■■□□ 2
PDCD2-209	ENST00000542896	SCARA5	Q6ZMJ2	495 aa		27.55	■■■□□ 2
PDCD2-209	ENST00000542896	VRTN	Q9H8Y1	702 aa		27.55	■■■□□ 2
PDCD2-209	ENST00000542896	DMAP1	Q9NPF5	467 aa	Predicted RBP	27.55	■■■□□ 2
PDCD2-209	ENST00000542896	BCCIP	Q9P287	314 aa	Known RBP eCLIP	27.55	■■■□□ 2
PDCD2-209	ENST00000542896	SGK1	O00141	431 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	PTPRD	P23468	1912 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	AP3M2	P53677	418 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	SLC5A3	P53794	718 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	CUL4B	Q13620	913 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	BTBD8	Q5XKL5	378 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	KIAA1549L	Q6ZVL6	1849 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	SCAMP5	Q8TAC9	235 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	OLIG1	Q8TAK6	271 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	GOLGA5	Q8TBA6	731 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	PLEKHO2	Q8TD55	490 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	WHAMM	Q8TF30	809 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	OTUB2	Q96DC9	234 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	SPACA7	Q96KW9	195 aa		27.54	■■■□□ 2
PDCD2-209	ENST00000542896	MYO16	Q9Y6X6	1858 aa		27.53	■■■□□ 2
PDCD2-209	ENST00000542896		A0A0A0MRY4	1105 aa		27.53	■■■□□ 2
PDCD2-209	ENST00000542896	TNFRSF4	P43489	277 aa		27.53	■■■□□ 2
PDCD2-209	ENST00000542896	NCOA4	Q13772	614 aa		27.53	■■■□□ 2
PDCD2-209	ENST00000542896	RLN3	Q8WXF3	142 aa		27.53	■■■□□ 2
PDCD2-209	ENST00000542896	PIGK	Q92643	395 aa		27.53	■■■□□ 2
PDCD2-209	ENST00000542896	SMARCD1	Q96GM5	515 aa		27.53	■■■□□ 2
PDCD2-209	ENST00000542896	ZFR	Q96KR1	1074 aa	Known RBP	27.53	■■■□□ 2
PDCD2-209	ENST00000542896	NACA2	Q9H009	215 aa		27.53	■■■□□ 2
PDCD2-209	ENST00000542896	ZDHHC4	Q9NPG8	344 aa		27.53	■■■□□ 2
PDCD2-209	ENST00000542896	TMEM9B	Q9NQ34	198 aa		27.53	■■■□□ 2
PDCD2-209	ENST00000542896	LRRIQ3	A6PVS8	624 aa	Predicted RBP	27.52	■■■□□ 2
PDCD2-209	ENST00000542896	PATE3	B3GLJ2	98 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	MAP3K13	O43283	966 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	P2RY2	P41231	377 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	KIR2DL1	P43626	348 aa	Predicted RBP	27.52	■■■□□ 2
PDCD2-209	ENST00000542896	ME1	P48163	572 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	PAQR9	Q6ZVX9	377 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	LPCAT2	Q7L5N7	544 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	PGBD3	Q8N328	593 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	NAT16	Q8N8M0	369 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	PARD3B	Q8TEW8	1205 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	CCSER2	Q9H7U1	834 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	COMMD8	Q9NX08	183 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	GMIP	Q9P107	970 aa		27.52	■■■□□ 2
PDCD2-209	ENST00000542896	TBC1D3B	A6NDS4	549 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	TNFRSF10B	O14763	440 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	AP1G2	O75843	785 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	TUB	P50607	506 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	SNX30	Q5VWJ9	437 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	CEP57L1	Q8IYX8	460 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	HMGB4	Q8WW32	186 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	ELMO3	Q96BJ8	720 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	SDCBP2	Q9H190	292 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	KRT82	Q9NSB4	513 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	PCDHA7	Q9UN72	937 aa		27.51	■■□□□ 1.99
PDCD2-209	ENST00000542896	TCRBV21S2A2	A0A5A6	115 aa		27.5	■■□□□ 1.99
PDCD2-209	ENST00000542896	C4BPA	P04003	597 aa	Known RBP	27.5	■■□□□ 1.99
PDCD2-209	ENST00000542896	CHRM1	P11229	460 aa	Predicted RBP	27.5	■■□□□ 1.99
PDCD2-209	ENST00000542896	IRX4	P78413	519 aa		27.5	■■□□□ 1.99
PDCD2-209	ENST00000542896	BYSL	Q13895	437 aa	Known RBP	27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms