RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 SMYD3Q9H7B4 428 aa18.49■□□□□ 0.55
PPP1CA-210ENST00000542876 POLMQ9NP87 494 aaPredicted RBP18.49■□□□□ 0.55
PPP1CA-210ENST00000542876 DMAP1Q9NPF5 467 aaPredicted RBP18.49■□□□□ 0.55
PPP1CA-210ENST00000542876 ARHGEF4Q9NR80 690 aa18.49■□□□□ 0.55
PPP1CA-210ENST00000542876 SH3BP1Q9Y3L3 701 aa18.49■□□□□ 0.55
PPP1CA-210ENST00000542876 GREB1Q4ZG55 1949 aa18.49■□□□□ 0.55
PPP1CA-210ENST00000542876 CHD8Q9HCK8 2581 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 E2F8A0AVK6 867 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 KHNYNO15037 678 aaKnown RBP18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 KRT37O76014 449 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 KCNK5O95279 499 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 TRIM21P19474 475 aaKnown RBP18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 GRIA2P42262 883 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 SLC6A11P48066 632 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 CASP4P49662 377 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 NCOA4Q13772 614 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 GAB4Q2WGN9 574 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 PREPLQ4J6C6 727 aaPredicted RBP18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 EOGTQ5NDL2 527 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 NUDT18Q6ZVK8 323 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 CYP2U1Q7Z449 544 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 FAM35AQ86V20 835 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 ALLCQ8N6M5 410 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 TXNDC5Q8NBS9 432 aaKnown RBP18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 MDGA1Q8NFP4 955 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 OTUB2Q96DC9 234 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 SMARCD1Q96GM5 515 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 SPACA7Q96KW9 195 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 KCNK16Q96T55 309 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 VRTNQ9H8Y1 702 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 TMEM30AQ9NV96 361 aa18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 BCCIPQ9P287 314 aaKnown RBP eCLIP18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 CHORDC1Q9UHD1 332 aaPredicted RBP18.48■□□□□ 0.55
PPP1CA-210ENST00000542876 C4orf47A7E2U8 309 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 MAP3K13O43283 966 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 COCHO43405 550 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 KLF8O95600 359 aaPredicted RBP18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 TIE1P35590 1138 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 TNFRSF4P43489 277 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 DHPSP49366 369 aaPredicted RBP18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 SLC5A3P53794 718 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 CDH8P55286 799 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 GAD2Q05329 585 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 CUL4BQ13620 913 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 SCARA5Q6ZMJ2 495 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 IL17RCQ8NAC3 791 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 WHAMMQ8TF30 809 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 BACH2Q9BYV9 841 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 GZF1Q9H116 711 aaPredicted RBP18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 EXOC1Q9NV70 894 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 COMMD8Q9NX08 183 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 ANAPC1Q9H1A4 1944 aa18.47■□□□□ 0.55
PPP1CA-210ENST00000542876 LRRIQ3A6PVS8 624 aaPredicted RBP18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 AP1G2O75843 785 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 ZSCAN22P10073 491 aaPredicted RBP18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 PMLP29590 882 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 TUBP50607 506 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 KDSRQ06136 332 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 BYSLQ13895 437 aaKnown RBP18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 LY6G5CQ5SRR4 150 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 RESP18Q5W5W9 173 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 ATL3Q6DD88 541 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 PSAPL1Q6NUJ1 521 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 TMEM92Q6UXU6 159 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 SCAMP5Q8TAC9 235 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 PARD3BQ8TEW8 1205 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 CFAP45Q9UL16 551 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 PCDHA7Q9UN72 937 aa18.46■□□□□ 0.55
PPP1CA-210ENST00000542876 A0A0A0MRY4 1105 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 LNP1A1A4G5 178 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 TBC1D3BA6NDS4 549 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 SGK1O00141 431 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 F13A1P00488 732 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 SGSM1Q2NKQ1 1148 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 SNX30Q5VWJ9 437 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 LPCAT2Q7L5N7 544 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 TRMT11Q7Z4G4 463 aaKnown RBP18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 ACOT1Q86TX2 421 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 C12orf40Q86WS4 652 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 PGBD3Q8N328 593 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 PIGKQ92643 395 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 FBXO44Q9H4M3 255 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 CCSER2Q9H7U1 834 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 TMEM9BQ9NQ34 198 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 KRT82Q9NSB4 513 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 DEC1Q9P2X7 70 aa18.45■□□□□ 0.54
PPP1CA-210ENST00000542876 ANTXRLA6NF34 631 aa18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 TNFRSF10BO14763 440 aa18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 C4BPAP04003 597 aaKnown RBP18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 RPN1P04843 607 aaKnown RBP18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 SLFN14P0C7P3 912 aa18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 BCKDHBP21953 392 aa18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 NOVA1P51513 510 aaKnown RBP18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 CLDN10P78369 228 aa18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 SHC2P98077 582 aa18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 MESP2Q0VG99 397 aa18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 ANO4Q32M45 955 aa18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 EMC10Q5UCC4 262 aa18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 PAQR9Q6ZVX9 377 aa18.44■□□□□ 0.54
PPP1CA-210ENST00000542876 SFTPA1Q8IWL2 248 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms