RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PFKLP17858 780 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 HOXD13P35453 343 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 ACTN2P35609 894 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 MCM2P49736 904 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 CCT4P50991 539 aaKnown RBP4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 AFF3P51826 1226 aaKnown RBP4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 PTTG1IPP53801 180 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 TSPY1Q01534 308 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 ROR1Q01973 937 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 GPS1Q13098 491 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 ATP1A4Q13733 1029 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 PCOLCEQ15113 449 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 GPR68Q15743 365 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 BAK1Q16611 211 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 TRIM60Q495X7 471 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 UTP14CQ5TAP6 766 aaKnown RBP4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 CACHD1Q5VU97 1274 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 TRMT10BQ6PF06 316 aaKnown RBP4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 DBX2Q6ZNG2 339 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 TMTC3Q6ZXV5 915 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 SYT13Q7L8C5 426 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 ARMC8Q8IUR7 673 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 NGEFQ8N5V2 710 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 TMIEQ8NEW7 156 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 CPT1BQ92523 772 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 PKNOX2Q96KN3 472 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 ZMAT2Q96NC0 199 aaKnown RBP4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 MOGAT1Q96PD6 335 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 MESP1Q9BRJ9 268 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 C11orf84Q9BUA3 381 aaPredicted RBP4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 XYLT2Q9H1B5 865 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 NDUFAF4Q9P032 175 aa4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 DNMT3BQ9UBC3 853 aaKnown RBP4.38□□□□□ -1.71
SFSWAP-211ENST00000542813 PTPRMP28827 1452 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 ABCC2Q92887 1545 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 CDHR4A6H8M9 788 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 VWA3AA6NCI4 1184 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM90A18PA6NE21 464 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM90A16PA6NEW6 464 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM90A9PA6NNJ1 464 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 EFCAB8A8MWE9 144 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM90A5PA8MXJ8 464 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 STX16-NPEPL1H3BU86 382 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 STX16O14662 325 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 PTP4A3O75365 173 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 AGFG2O95081 481 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 RASAL1O95294 804 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 TFRCP02786 760 aaKnown RBP4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 AMHP03971 560 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM90A15PP0C7V4 464 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM90A14PP0C7W9 464 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 ARP10275 920 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 ACADMP11310 421 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 GLULP15104 373 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 SERPINA4P29622 427 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 VIPR1P32241 457 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 GZMKP49863 264 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 RBM5P52756 815 aaKnown RBP eCLIP4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 EPHB3P54753 998 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 MLLT6P55198 1093 aaPredicted RBP4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 BPIFB4P59827 614 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 RAP2BP61225 183 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 EIF4A2Q14240 407 aaKnown RBP4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 GRM4Q14833 912 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 PSMD6Q15008 389 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 ZNF750Q32MQ0 723 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 CTXN3Q4LDR2 81 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 PPP1R32Q7Z5V6 425 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 KCTD20Q7Z5Y7 419 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 B3GNT8Q7Z7M8 397 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 TTLL6Q8N841 843 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 ANKRD53Q8N9V6 530 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 KYQ8NBH2 561 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 SLC17A8Q8NDX2 589 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 SLC35B2Q8TB61 432 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 CREB3L4Q8TEY5 395 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 WDR60Q8WVS4 1066 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 ZCCHC14Q8WYQ9 949 aaKnown RBP4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 FAM227BQ96M60 508 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 ASB2Q96Q27 587 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 IMPG2Q9BZV3 1241 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 KIAA1683Q9H0B3 1180 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 GSTO2Q9H4Y5 243 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 FBXO34Q9NWN3 711 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 NCDNQ9UBB6 729 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 HESX1Q9UBX0 185 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 GIMAP2Q9UG22 337 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 KCND3Q9UK17 655 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 HSF4Q9ULV5 492 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 CNTN6Q9UQ52 1028 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 CDY1Q9Y6F8 540 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 PPRC1Q5VV67 1664 aaKnown RBP4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 KAT6BQ8WYB5 2073 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 RPGRIP1LQ68CZ1 1315 aa4.37□□□□□ -1.71
SFSWAP-211ENST00000542813 PNMA6EA0A0J9YXQ4 647 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 CCDC78A2IDD5 438 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 PABPN1LA6NDY0 278 aaKnown RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 OTOL1A6NHN0 477 aaPredicted RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 E9PLN8 166 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms