RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 NOMO1Q15155 1222 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 RFX6Q8HWS3 928 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 PQLC3Q8N755 202 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 B3GALNT2Q8NCR0 500 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 FAM172AQ8WUF8 416 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 HSFY1Q96LI6 401 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 RNF157Q96PX1 679 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 TBCBQ99426 244 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 PCDH18Q9HCL0 1135 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 EURLQ9NYK6 297 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 CACNG4Q9UBN1 327 aa14.82□□□□□ -0.04
LDB3-207ENST00000542786 TMEM88BA6NKF7 163 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 ZNF487B1APH4 448 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 RASGRF2O14827 1237 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 XPO1O14980 1071 aaKnown RBP14.81□□□□□ -0.04
LDB3-207ENST00000542786 MDM4O15151 490 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 PRPSAP2O60256 369 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 CTSHP09668 335 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 CCND3P30281 292 aaPredicted RBP14.81□□□□□ -0.04
LDB3-207ENST00000542786 RPL22P35268 128 aaKnown RBP14.81□□□□□ -0.04
LDB3-207ENST00000542786 MLH1P40692 756 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 CDH6P55285 790 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 SNX16P57768 344 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 ATP11AP98196 1134 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 ADCY1Q08828 1119 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 PDK2Q15119 407 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 CA9Q16790 459 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 BOLA3Q53S33 107 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 ZC3H12AQ5D1E8 599 aaKnown RBP14.81□□□□□ -0.04
LDB3-207ENST00000542786 WSCD1Q658N2 575 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 AGMOQ6ZNB7 445 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 RSPH3Q86UC2 560 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 UNC45BQ8IWX7 931 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 GAD1Q99259 594 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 SNRNP25Q9BV90 132 aaKnown RBP14.81□□□□□ -0.04
LDB3-207ENST00000542786 GPATCH2LQ9NWQ4 482 aa14.81□□□□□ -0.04
LDB3-207ENST00000542786 M0QZ92 97 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 SGK1O00141 431 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 CYB561D2O14569 222 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 SDC4P31431 198 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 ACADSBP45954 432 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 CDO1Q16878 200 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 TRIM71Q2Q1W2 868 aaKnown RBP14.8□□□□□ -0.04
LDB3-207ENST00000542786 OTUD1Q5VV17 481 aaPredicted RBP14.8□□□□□ -0.04
LDB3-207ENST00000542786 SLC9A4Q6AI14 798 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 NPNTQ6UXI9 565 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 TNIP3Q96KP6 325 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 SERPINB12Q96P63 405 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 RBM15Q96T37 977 aaKnown RBP eCLIP14.8□□□□□ -0.04
LDB3-207ENST00000542786 CALN1Q9BXU9 219 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 EPN3Q9H201 632 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 TSPYL2Q9H2G4 693 aaPredicted RBP14.8□□□□□ -0.04
LDB3-207ENST00000542786 NGRNQ9NPE2 291 aaKnown RBP14.8□□□□□ -0.04
LDB3-207ENST00000542786 XPNPEP3Q9NQH7 507 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 SLC38A7Q9NVC3 462 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 ABT1Q9ULW3 272 aaKnown RBP14.8□□□□□ -0.04
LDB3-207ENST00000542786 RGS16O15492 202 aaPredicted RBP14.8□□□□□ -0.04
LDB3-207ENST00000542786 MGEA5O60502 916 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 RPLP2P05387 115 aaKnown RBP14.8□□□□□ -0.04
LDB3-207ENST00000542786 ASGR1P07306 291 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 PTPN1P18031 435 aaKnown RBP14.8□□□□□ -0.04
LDB3-207ENST00000542786 MAGEA4P43358 317 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 SLCO1A2P46721 670 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 EIF3EP60228 445 aaKnown RBP14.8□□□□□ -0.04
LDB3-207ENST00000542786 KCNA10Q16322 511 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 CEP128Q6ZU80 1094 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 BNIPLQ7Z465 357 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 PLD5Q8N7P1 536 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 NAT8LQ8N9F0 302 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 C3orf58Q8NDZ4 430 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 PCDH19Q8TAB3 1148 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 CPT1BQ92523 772 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 LPPQ93052 612 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 NCAPGQ9BPX3 1015 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 DUSP16Q9BY84 665 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 PHACTR1Q9C0D0 580 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 CNOT10Q9H9A5 744 aaKnown RBP14.8□□□□□ -0.04
LDB3-207ENST00000542786 SPC25Q9HBM1 224 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 CRTAC1Q9NQ79 661 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 CALCOCO1Q9P1Z2 691 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 LGALS13Q9UHV8 139 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 GIT1Q9Y2X7 761 aa14.8□□□□□ -0.04
LDB3-207ENST00000542786 TLDC2A0PJX2 215 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 ARL5CA6NH57 179 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 SMIM23A6NLE4 172 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 ALOX15BO15296 676 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 ZNF623O75123 536 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 ALDH1A1P00352 501 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 PLCB3Q01970 1234 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 TFDP2Q14188 446 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 FASTKD3Q14CZ7 662 aaKnown RBP14.79□□□□□ -0.04
LDB3-207ENST00000542786 LONRF1Q17RB8 773 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 FAM47CQ5HY64 1035 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 ANKRD22Q5VYY1 191 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 PIGZQ86VD9 579 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 KCTD13Q8WZ19 329 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 CENPTQ96BT3 561 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 SENP8Q96LD8 212 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 C9orf72Q96LT7 481 aa14.79□□□□□ -0.04
LDB3-207ENST00000542786 MTMR10Q9NXD2 777 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms