RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 TUBP50607 506 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 USP46P62068 366 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 PSMC1P62191 440 aaKnown RBP9.52□□□□□ -0.89
UBC-211ENST00000542416 TRIP6Q15654 476 aaKnown RBP9.52□□□□□ -0.89
UBC-211ENST00000542416 WDR45BQ5MNZ6 344 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 LY6G5CQ5SRR4 150 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 EMC10Q5UCC4 262 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 HS2ST1Q7LGA3 356 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 KBTBD7Q8WVZ9 684 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 ADAMTS14Q8WXS8 1223 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 PCED1BQ96HM7 432 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 CRTAC1Q9NQ79 661 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 COMMD8Q9NX08 183 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 APOBEC2Q9Y235 224 aaKnown RBP9.52□□□□□ -0.89
UBC-211ENST00000542416 STARD13Q9Y3M8 1113 aa9.52□□□□□ -0.89
UBC-211ENST00000542416 KIF26AQ9ULI4 1882 aaPredicted RBP9.51□□□□□ -0.89
UBC-211ENST00000542416 GON4LQ3T8J9 2241 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 GOLGA8IPA6NC78 632 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 PCNX2A6NKB5 2137 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 GOLGA8JA6NMD2 632 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 NDUFS2O75306 463 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 TULP3O75386 442 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 SEC24BO95487 1268 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 CHRM1P11229 460 aaPredicted RBP9.51□□□□□ -0.89
UBC-211ENST00000542416 CD59P13987 128 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 IDEP14735 1019 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 PTPN1P18031 435 aaKnown RBP9.51□□□□□ -0.89
UBC-211ENST00000542416 GJB2P29033 226 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 WNT7BP56706 349 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 TNNC1P63316 161 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 KDSRQ06136 332 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 KCNA1Q09470 495 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 RABEP1Q15276 862 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 E2F5Q15329 346 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 MDH1BQ5I0G3 518 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 C10orf76Q5T2E6 689 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 HECTD3Q5T447 861 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 RRAGBQ5VZM2 374 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 CCDC73Q6ZRK6 1079 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 C12orf40Q86WS4 652 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 WDR49Q8IV35 697 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 ETFBKMTQ8IXQ9 262 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 NUP93Q8N1F7 819 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 PHTF2Q8N3S3 785 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 FRMD1Q8N878 549 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 TRIML1Q8N9V2 468 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 TERB1Q8NA31 727 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 OR6B3Q8NGW1 331 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 NOC3LQ8WTT2 800 aaKnown RBP9.51□□□□□ -0.89
UBC-211ENST00000542416 FBXO32Q969P5 355 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 ZNF419Q96HQ0 510 aaPredicted RBP9.51□□□□□ -0.89
UBC-211ENST00000542416 XPO6Q96QU8 1125 aaKnown RBP9.51□□□□□ -0.89
UBC-211ENST00000542416 CBWD1Q9BRT8 395 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 CCDC86Q9H6F5 360 aaKnown RBP9.51□□□□□ -0.89
UBC-211ENST00000542416 SPHK2Q9NRA0 654 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 TBC1D7Q9P0N9 293 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 CALCOCO1Q9P1Z2 691 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 NFE2L3Q9Y4A8 694 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 GPSM3Q9Y4H4 160 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 ATP8B3O60423 1300 aa9.51□□□□□ -0.89
UBC-211ENST00000542416 ATXN2Q99700 1313 aaKnown RBP9.51□□□□□ -0.89
UBC-211ENST00000542416 ASCC3Q8N3C0 2202 aaKnown RBP9.51□□□□□ -0.89
UBC-211ENST00000542416 SCN1AP35498 2009 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 DMXL2Q8TDJ6 3036 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 IGHV1OR15-9A0A0B4J2B8 117 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 EIF4E1BA6NMX2 242 aaKnown RBP9.5□□□□□ -0.89
UBC-211ENST00000542416 GFRA2O00451 464 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 HCRTO43612 131 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 GABRG2P18507 467 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 GOLGA8FQ08AF8 430 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 GOLGA8DPQ0D2H9 430 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 MESP2Q0VG99 397 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 SCAPQ12770 1279 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 SF3A1Q15459 793 aaKnown RBP9.5□□□□□ -0.89
UBC-211ENST00000542416 CCDC142Q17RM4 750 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 ANO4Q32M45 955 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 PLEKHG6Q3KR16 790 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 SNX30Q5VWJ9 437 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 LARP1BQ659C4 914 aaKnown RBP9.5□□□□□ -0.89
UBC-211ENST00000542416 GRAMD4Q6IC98 578 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 CCNI2Q6ZMN8 369 aaPredicted RBP9.5□□□□□ -0.89
UBC-211ENST00000542416 SFTPA1Q8IWL2 248 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 CCDC65Q8IXS2 484 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 CHPFQ8IZ52 775 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 RGL4Q8IZJ4 473 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 SCFD1Q8WVM8 642 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 DNAJC19Q96DA6 116 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 HSPA12BQ96MM6 686 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 LRRC27Q9C0I9 530 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 NACA2Q9H009 215 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 IKZF4Q9H2S9 585 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 PCIF1Q9H4Z3 704 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.5□□□□□ -0.898e-9■■■■■ 41.3
UBC-211ENST00000542416 PPP4R2Q9NY27 417 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 KIAA1522Q9P206 1035 aaPredicted RBP9.5□□□□□ -0.89
UBC-211ENST00000542416 WDR35Q9P2L0 1181 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 SMC3Q9UQE7 1217 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.5□□□□□ -0.89
UBC-211ENST00000542416 ATG2BQ96BY7 2078 aa9.5□□□□□ -0.89
UBC-211ENST00000542416 DSPP15924 2871 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms