RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 KRT19P08727 400 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 PDGFRBP09619 1106 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 HOXB2P14652 356 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 NDUFV2P19404 249 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 EIF2DP41214 584 aaKnown RBP12.6□□□□□ -0.39
COPA-205ENST00000541366 CACNA2D1P54289 1103 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 IFRD2Q12894 506 aaPredicted RBP12.6□□□□□ -0.39
COPA-205ENST00000541366 HNRNPDQ14103 355 aaKnown RBP12.6□□□□□ -0.39
COPA-205ENST00000541366 C10orf76Q5T2E6 689 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 SLFN12LQ6IEE8 588 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 SLC36A4Q6YBV0 504 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 TOGARAM2Q6ZUX3 1019 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 KBTBD7Q8WVZ9 684 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 WBP2Q969T9 261 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 SPATA17Q96L03 361 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 IL21RQ9HBE5 538 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 TMEM30AQ9NV96 361 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 GDAP2Q9NXN4 497 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 MAGEC2Q9UBF1 373 aaPredicted RBP12.6□□□□□ -0.39
COPA-205ENST00000541366 LIMCH1Q9UPQ0 1083 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 SHROOM3Q8TF72 1996 aa12.6□□□□□ -0.39
COPA-205ENST00000541366 A0A1W2PQD8 194 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 GOLGA8IPA6NC78 632 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 GOLGA8JA6NMD2 632 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 F8VP50 259 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 SLC9A3R1O14745 358 aaPredicted RBP12.59□□□□□ -0.39
COPA-205ENST00000541366 CBFA2T3O75081 653 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 TBCAO75347 108 aaKnown RBP12.59□□□□□ -0.39
COPA-205ENST00000541366 TULP3O75386 442 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 OAS1P00973 400 aaKnown RBP12.59□□□□□ -0.39
COPA-205ENST00000541366 MBL2P11226 248 aaPredicted RBP12.59□□□□□ -0.39
COPA-205ENST00000541366 PCSK1P29120 753 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 LHX1P48742 406 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 PDE6CP51160 858 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 HMGN5P82970 282 aaKnown RBP12.59□□□□□ -0.39
COPA-205ENST00000541366 CYP27A1Q02318 531 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 TAF10Q12962 218 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 GRIK2Q13002 908 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 SLC14A1Q13336 389 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 EGFLAMQ63HQ2 1017 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 C4orf50Q6ZRC1 276 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 RABEPKQ7Z6M1 372 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 SFR1Q86XK3 245 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 NT5DC4Q86YG4 428 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 BRSK2Q8IWQ3 736 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 ETFBKMTQ8IXQ9 262 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 KCTD17Q8N5Z5 321 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 TOP6BLQ8N6T0 577 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 LRRC52Q8N7C0 313 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 TTLL2Q9BWV7 592 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 MTMR12Q9C0I1 747 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 PDE11AQ9HCR9 933 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 CD248Q9HCU0 757 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 NME7Q9Y5B8 376 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 RAD54BQ9Y620 910 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 CABIN1Q9Y6J0 2220 aa12.59□□□□□ -0.39
COPA-205ENST00000541366 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.58□□□□□ -0.4
COPA-205ENST00000541366 SCP2P22307 547 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 NTSR1P30989 418 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 GRIN1Q05586 938 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 CYP4F3Q08477 520 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 MCTP1Q6DN14 999 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 VSTM1Q6UX27 236 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 ZNF720Q7Z2F6 126 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 TMEM25Q86YD3 366 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 BBS7Q8IWZ6 715 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 SETD7Q8WTS6 366 aaKnown RBP12.58□□□□□ -0.4
COPA-205ENST00000541366 NOC3LQ8WTT2 800 aaKnown RBP12.58□□□□□ -0.4
COPA-205ENST00000541366 RAD54LQ92698 747 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 PCED1BQ96HM7 432 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 ZNF419Q96HQ0 510 aaPredicted RBP12.58□□□□□ -0.4
COPA-205ENST00000541366 ZFRQ96KR1 1074 aaKnown RBP12.58□□□□□ -0.4
COPA-205ENST00000541366 TRIM9Q9C026 710 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 TBC1D7Q9P0N9 293 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 PCOLCE2Q9UKZ9 415 aa12.58□□□□□ -0.4
COPA-205ENST00000541366 APOBEC2Q9Y235 224 aaKnown RBP12.58□□□□□ -0.4
COPA-205ENST00000541366 GOLGA8CPA6NN73 597 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 WASH3PC4AMC7 463 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 GABBR2O75899 941 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 ATXN1LP0C7T5 689 aaKnown RBP12.57□□□□□ -0.4
COPA-205ENST00000541366 PFKLP17858 780 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 ANXA13P27216 316 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 RBP5P82980 135 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 POU5F1Q01860 360 aaKnown RBP12.57□□□□□ -0.4
COPA-205ENST00000541366 GAD2Q05329 585 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 ANO4Q32M45 955 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 MDH1BQ5I0G3 518 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 DYMQ7RTS9 669 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 LIMS2Q7Z4I7 341 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 TERB1Q8NA31 727 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 GLIS3Q8NEA6 775 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 OR5B17Q8NGF7 314 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 IPO4Q8TEX9 1081 aaKnown RBP12.57□□□□□ -0.4
COPA-205ENST00000541366 CACTINQ8WUQ7 758 aaKnown RBP12.57□□□□□ -0.4
COPA-205ENST00000541366 CALML4Q96GE6 196 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 ST6GALNAC4Q9H4F1 302 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 PCIF1Q9H4Z3 704 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 PRDM16Q9HAZ2 1276 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 SCUBE2Q9NQ36 999 aa12.57□□□□□ -0.4
COPA-205ENST00000541366 TOR4AQ9NXH8 423 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms