RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 NAALADL1Q9UQQ1 740 aa10.89□□□□□ -0.67
CHFR-219ENST00000541341 EMSYQ7Z589 1322 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.88□□□□□ -0.67
CHFR-219ENST00000541341 FOXN3O00409 490 aaPredicted RBP10.88□□□□□ -0.67
CHFR-219ENST00000541341 EML1O00423 815 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 CSDE1O75534 798 aaKnown RBP10.88□□□□□ -0.67
CHFR-219ENST00000541341 CIB2O75838 187 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 TJP3O95049 919 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 RTN3O95197 1032 aaPredicted RBP10.88□□□□□ -0.67
CHFR-219ENST00000541341 ASMTLO95671 621 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 CCNE2O96020 404 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 SLCO1A2P46721 670 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 CCNHP51946 323 aaPredicted RBP10.88□□□□□ -0.67
CHFR-219ENST00000541341 JAK3P52333 1124 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 HTRA4P83105 476 aaPredicted RBP10.88□□□□□ -0.67
CHFR-219ENST00000541341 SLC34A1Q06495 639 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 CUL3Q13618 768 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 DBN1Q16643 649 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 LONRF1Q17RB8 773 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 LEXMQ3ZCV2 418 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 LGSNQ5TDP6 509 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 ABHD15Q6UXT9 468 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 NOP9Q86U38 636 aaKnown RBP10.88□□□□□ -0.67
CHFR-219ENST00000541341 TRABD2AQ86V40 505 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 ECHDC2Q86YB7 292 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 TMEM192Q8IY95 271 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 RCOR2Q8IZ40 523 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 GJD3Q8N144 294 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 TTC13Q8NBP0 860 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 EXD1Q8NHP7 514 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 RAB3IL1Q8TBN0 382 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 TMC2Q8TDI7 906 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 GJA10Q969M2 543 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 ZNF653Q96CK0 615 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 MRPL38Q96DV4 380 aaKnown RBP10.88□□□□□ -0.67
CHFR-219ENST00000541341 FAM212AQ96EL1 285 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 NT5C1BQ96P26 610 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 GBP5Q96PP8 586 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 GPR20Q99678 358 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 HSD17B14Q9BPX1 270 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 CENPKQ9BS16 269 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 BTBD10Q9BSF8 475 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 TRIM4Q9C037 500 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 UNC45AQ9H3U1 944 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 IGFLR1Q9H665 355 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 KIAA1586Q9HCI6 787 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 DMAP1Q9NPF5 467 aaPredicted RBP10.88□□□□□ -0.67
CHFR-219ENST00000541341 CLDND1Q9NY35 253 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 RGL1Q9NZL6 768 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 LMCD1Q9NZU5 365 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 PSMC3IPQ9P2W1 217 aaPredicted RBP10.88□□□□□ -0.67
CHFR-219ENST00000541341 SHOC2Q9UQ13 582 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 EFR3BQ9Y2G0 817 aa10.88□□□□□ -0.67
CHFR-219ENST00000541341 TTC3P53804 2025 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 ARHGEF35A5YM69 484 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 WDR64B1ANS9 1081 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 DKC1O60832 514 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHFR-219ENST00000541341 EFCAB14O75071 495 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 LRRN2O75325 713 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 FKBP6O75344 327 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 ACSL3O95573 720 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 PYGMP11217 842 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 CTNNB1P35222 781 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 HOXD13P35453 343 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 MAGEA4P43358 317 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 MXI1P50539 228 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 ITGA8P53708 1063 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 ACTR2P61160 394 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 IGBP1P78318 339 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 ZNF211Q13398 564 aaPredicted RBP10.87□□□□□ -0.67
CHFR-219ENST00000541341 ARHGAP44Q17R89 818 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 DNAL1Q4LDG9 190 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 ODR4Q5SWX8 454 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 LRRC38Q5VT99 294 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 TTC27Q6P3X3 843 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 LONP2Q86WA8 852 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 EGFL6Q8IUX8 553 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 SRRM1Q8IYB3 904 aaKnown RBP10.87□□□□□ -0.67
CHFR-219ENST00000541341 KATNAL2Q8IYT4 538 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 VPS52Q8N1B4 723 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 TEKT4Q8WW24 435 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 SEPT1Q8WYJ6 367 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 SHC3Q92529 594 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 TOP1MTQ969P6 601 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 PPP1R14BQ96C90 147 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 ERP27Q96DN0 273 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 ARHGEF26Q96DR7 871 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 NSL1Q96IY1 281 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 TBC1D10AQ9BXI6 508 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 OSBPL8Q9BZF1 889 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 DCLK3Q9C098 648 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 GOLPH3Q9H4A6 298 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 TRABDQ9H4I3 376 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 C17orf75Q9HAS0 396 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 POLD4Q9HCU8 107 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 DDX56Q9NY93 547 aaKnown RBP10.87□□□□□ -0.67
CHFR-219ENST00000541341 NINJ2Q9NZG7 142 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 STX18Q9P2W9 335 aaKnown RBP10.87□□□□□ -0.67
CHFR-219ENST00000541341 COQ4Q9Y3A0 265 aa10.87□□□□□ -0.67
CHFR-219ENST00000541341 ASB3Q9Y575 518 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms