RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ST7Q9NRC1 585 aa9.85□□□□□ -0.83
DDX55-208ENST00000541259 ADAM22Q9P0K1 906 aa9.85□□□□□ -0.83
DDX55-208ENST00000541259 CHORDC1Q9UHD1 332 aaPredicted RBP9.85□□□□□ -0.83
DDX55-208ENST00000541259 FBXW11Q9UKB1 542 aa9.85□□□□□ -0.83
DDX55-208ENST00000541259 CEP83Q9Y592 693 aa9.85□□□□□ -0.83
DDX55-208ENST00000541259 PCDHA13Q9Y5I0 950 aa9.85□□□□□ -0.83
DDX55-208ENST00000541259 BRWD1Q9NSI6 2320 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 E5RJQ4 531 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 TNFRSF10BO14763 440 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 GJB6O95452 261 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 GLUD1P00367 558 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 ABL1P00519 1130 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 ABCB4P21439 1286 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 MMP8P22894 467 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 ELF1P32519 619 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 GABRB2P47870 512 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 RPL34P49207 117 aaKnown RBP9.84□□□□□ -0.83
DDX55-208ENST00000541259 USP46P62068 366 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 MTMR3Q13615 1198 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 ADGRE1Q14246 886 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 SPA17Q15506 151 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 DUSP6Q16828 381 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 MON1BQ7L1V2 547 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 TMEM110Q86TL2 294 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 SCUBE3Q8IX30 993 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 SCAMP5Q8TAC9 235 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 FEZF2Q8TBJ5 459 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 CLEC4CQ8WTT0 213 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 STK32AQ8WU08 396 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 ARHGEF26Q96DR7 871 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 C8orf48Q96LL4 319 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 UBXN6Q9BZV1 441 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 MIS12Q9H081 205 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 THAP2Q9H0W7 228 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 IGFLR1Q9H665 355 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 TLE6Q9H808 572 aa9.84□□□□□ -0.83
DDX55-208ENST00000541259 PRRG1O14668 218 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 PAPSS1O43252 624 aaPredicted RBP9.83□□□□□ -0.84
DDX55-208ENST00000541259 NRDCO43847 1150 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 H2AFZP0C0S5 128 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 RRM1P23921 792 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 TUFMP49411 452 aaKnown RBP9.83□□□□□ -0.84
DDX55-208ENST00000541259 TKTL1P51854 596 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 SLC5A3P53794 718 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 SLC8A3P57103 927 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 ADIGQ0VDE8 80 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 TWF1Q12792 350 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 IFRD2Q12894 506 aaPredicted RBP9.83□□□□□ -0.84
DDX55-208ENST00000541259 PTPROQ16827 1216 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 TCEAL5Q5H9L2 206 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 RAB41Q5JT25 222 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 OR6B2Q6IFH4 312 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 FAM183BPQ6ZVS7 135 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 H2AFVQ71UI9 128 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 XYLT1Q86Y38 959 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 C17orf53Q8N3J3 647 aaPredicted RBP9.83□□□□□ -0.84
DDX55-208ENST00000541259 VN1R2Q8NFZ6 395 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 SLC7A14Q8TBB6 771 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 KCTD13Q8WZ19 329 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 ZNF653Q96CK0 615 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 C18orf8Q96DM3 657 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 PIWIL1Q96J94 861 aaKnown RBP9.83□□□□□ -0.84
DDX55-208ENST00000541259 HSFY1Q96LI6 401 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 NOX5Q96PH1 765 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 ULBP1Q9BZM6 244 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 LACRTQ9GZZ8 138 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 SYNCQ9H7C4 482 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 LRRC4Q9HBW1 653 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 MAN1C1Q9NR34 630 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 MYO1AQ9UBC5 1043 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 TRIM10Q9UDY6 481 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 PPP2R2CQ9Y2T4 447 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 YIPF1Q9Y548 306 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 INSL5Q9Y5Q6 135 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 HCFC2Q9Y5Z7 792 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 DUSP10Q9Y6W6 482 aa9.83□□□□□ -0.84
DDX55-208ENST00000541259 TMEM265A0A087WTH1 108 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 TCRBV5S1A1TA0A578 114 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 ANKRD62A6NC57 917 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 SLC38A8A6NNN8 435 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 USP27XA6NNY8 438 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 GOLGA8SH3BPF8 625 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 CCL16O15467 120 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 LINC01565O15544 149 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 RFPL2O75678 378 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 C8AP07357 584 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 USP17L7P0C7H9 530 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 TMEM253P0C7T8 217 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 CD46P15529 392 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 ACADSBP45954 432 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 ALDH1A3P47895 512 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 PGFP49763 221 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 VAV2P52735 878 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 RPL10AP62906 217 aaKnown RBP9.82□□□□□ -0.84
DDX55-208ENST00000541259 GPC5P78333 572 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 KRT83P78385 493 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 HYAL1Q12794 435 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 KCNC3Q14003 757 aa9.82□□□□□ -0.84
DDX55-208ENST00000541259 ZNF268Q14587 947 aaPredicted RBP9.82□□□□□ -0.84
DDX55-208ENST00000541259 TAF5Q15542 800 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms